RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 KMT2EQ8IZD2 1858 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.83□□□□□ -0.2
PRKDC-207ENST00000536483 POTEMA6NI47 508 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 MED24O75448 989 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 BRD1O95696 1058 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 GALTP07902 379 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 EPCAMP16422 314 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 ATP2B1P20020 1258 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 MTHFRP42898 656 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 LAMTOR4Q0VGL1 99 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 MTMR3Q13615 1198 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 GNL2Q13823 731 aaKnown RBP13.83□□□□□ -0.2
PRKDC-207ENST00000536483 GLB1LQ6UWU2 654 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 KCTD17Q8N5Z5 321 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 TMEM87AQ8NBN3 555 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 ERMNQ8TAM6 284 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 BCL7CQ8WUZ0 217 aaPredicted RBP13.83□□□□□ -0.2
PRKDC-207ENST00000536483 IGSF21Q96ID5 467 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 NLRP4Q96MN2 994 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 MTRQ99707 1265 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 SMOC2Q9H3U7 446 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 FAM105AQ9NUU6 356 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 TBC1D13Q9NVG8 400 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 DAXXQ9UER7 740 aaPredicted RBP13.83□□□□□ -0.2
PRKDC-207ENST00000536483 SORCS3Q9UPU3 1222 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 PCDHB6Q9Y5E3 794 aa13.83□□□□□ -0.2
PRKDC-207ENST00000536483 OFD1O75665 1012 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 ASGR2P07307 311 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 CTSAP10619 480 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 SKIP12755 728 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 HOXA11P31270 313 aaPredicted RBP13.82□□□□□ -0.2
PRKDC-207ENST00000536483 PTENP60484 403 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 RNASELQ05823 741 aaKnown RBP13.82□□□□□ -0.2
PRKDC-207ENST00000536483 PTGDRQ13258 359 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 NOMO2Q5JPE7 1267 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 ATAT1Q5SQI0 421 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 CATSPER4Q7RTX7 472 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 DDX53Q86TM3 631 aaKnown RBP13.82□□□□□ -0.2
PRKDC-207ENST00000536483 UBALD2Q8IYN6 164 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 ATOH1Q92858 354 aaPredicted RBP13.82□□□□□ -0.2
PRKDC-207ENST00000536483 TMEM143Q96AN5 459 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 INTS4Q96HW7 963 aaKnown RBP13.82□□□□□ -0.2
PRKDC-207ENST00000536483 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 DNAJB4Q9UDY4 337 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 SMC3Q9UQE7 1217 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 IRAK3Q9Y616 596 aa13.82□□□□□ -0.2
PRKDC-207ENST00000536483 DMDP11532 3685 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 H0Y858 1186 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 B4GALT3O60512 393 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 SLC11A1P49279 550 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 RAB27AP51159 221 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 ATP2C1P98194 919 aaPredicted RBP13.81□□□□□ -0.2
PRKDC-207ENST00000536483 GIT2Q14161 759 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 HAUS3Q68CZ6 603 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 KIAA1841Q6NSI8 718 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 MRPL10Q7Z7H8 261 aaKnown RBP13.81□□□□□ -0.2
PRKDC-207ENST00000536483 ZNF280BQ86YH2 543 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 MCPH1Q8NEM0 835 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 FEZF2Q8TBJ5 459 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 PIGOQ8TEQ8 1089 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 SLC22A17Q8WUG5 538 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 RAB34Q9BZG1 259 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 MINDY3Q9H8M7 445 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 AGPAT5Q9NUQ2 364 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 DZANK1Q9NVP4 752 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 LIMD1Q9UGP4 676 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 RBM19Q9Y4C8 960 aaKnown RBP13.81□□□□□ -0.2
PRKDC-207ENST00000536483 CFAP54Q96N23 3096 aa13.81□□□□□ -0.2
PRKDC-207ENST00000536483 ZFHX2Q9C0A1 2572 aaPredicted RBP13.8□□□□□ -0.2
PRKDC-207ENST00000536483 CARNS1A5YM72 827 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 GFRA3O60609 400 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 AXLP30530 894 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 NBR1Q14596 966 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 IL17AQ16552 155 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 LARP1BQ659C4 914 aaKnown RBP13.8□□□□□ -0.2
PRKDC-207ENST00000536483 ARL6IP4Q66PJ3 421 aaKnown RBP13.8□□□□□ -0.2
PRKDC-207ENST00000536483 TMC5Q6UXY8 1006 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 AGMOQ6ZNB7 445 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 ZDHHC14Q8IZN3 488 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 TDRD5Q8NAT2 981 aaKnown RBP13.8□□□□□ -0.2
PRKDC-207ENST00000536483 RNF149Q8NC42 400 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 PGBD4Q96DM1 585 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 VN1R3Q9BXE9 311 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 IRF2BPLQ9H1B7 796 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 LRWD1Q9UFC0 647 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 PCDHB2Q9Y5E7 798 aa13.8□□□□□ -0.2
PRKDC-207ENST00000536483 H3BQV1 296 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 DDHD2O94830 711 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 SRGAP2CP0DJJ0 459 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 CYP11B2P19099 503 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 PDCP20941 246 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 GLRA2P23416 452 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 AFF1P51825 1210 aaKnown RBP13.79□□□□□ -0.2
PRKDC-207ENST00000536483 NUBP1P53384 320 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 TFDP1Q14186 410 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 PTPN14Q15678 1187 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 ECM1Q16610 540 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 HYIQ5T013 277 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
PRKDC-207ENST00000536483 CABP7Q86V35 215 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms