RNA–Protein interactions for RNA: ENST00000536274.5

MCF2-210, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-210ENST00000536274 ZFYVE28Q9HCC9 887 aa4□□□□□ -1.77
MCF2-210ENST00000536274 UTP6Q9NYH9 597 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 SELENONQ9NZV5 590 aa4□□□□□ -1.77
MCF2-210ENST00000536274 PRELID1Q9Y255 219 aa4□□□□□ -1.77
MCF2-210ENST00000536274 USP15Q9Y4E8 981 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 PCDHGA8Q9Y5G5 932 aa4□□□□□ -1.77
MCF2-210ENST00000536274 IQCA1LA6NCM1 817 aa4□□□□□ -1.77
MCF2-210ENST00000536274 TMEM88BA6NKF7 163 aa4□□□□□ -1.77
MCF2-210ENST00000536274 TTI1O43156 1089 aa4□□□□□ -1.77
MCF2-210ENST00000536274 FGFR1OPO95684 399 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 CCDC166P0CW27 439 aa4□□□□□ -1.77
MCF2-210ENST00000536274 VEGFAP15692 232 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 TOB1P50616 345 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 GEMIN4P57678 1058 aaKnown RBP4□□□□□ -1.77
MCF2-210ENST00000536274 COG7P83436 770 aa4□□□□□ -1.77
MCF2-210ENST00000536274 ARID5AQ03989 594 aa4□□□□□ -1.77
MCF2-210ENST00000536274 PTGDRQ13258 359 aa4□□□□□ -1.77
MCF2-210ENST00000536274 FAM209AQ5JX71 171 aa4□□□□□ -1.77
MCF2-210ENST00000536274 IQCEQ6IPM2 695 aa4□□□□□ -1.77
MCF2-210ENST00000536274 VASH1Q7L8A9 365 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 HS2ST1Q7LGA3 356 aa4□□□□□ -1.77
MCF2-210ENST00000536274 OSTM1Q86WC4 334 aa4□□□□□ -1.77
MCF2-210ENST00000536274 VSIG1Q86XK7 387 aa4□□□□□ -1.77
MCF2-210ENST00000536274 C2CD5Q86YS7 1000 aa4□□□□□ -1.77
MCF2-210ENST00000536274 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4□□□□□ -1.77
MCF2-210ENST00000536274 SLC25A41Q8N5S1 370 aa4□□□□□ -1.77
MCF2-210ENST00000536274 Q8N9G6 341 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 C12orf50Q8NA57 414 aaPredicted RBP4□□□□□ -1.77
MCF2-210ENST00000536274 TIPINQ9BVW5 301 aa4□□□□□ -1.77
MCF2-210ENST00000536274 PACSIN1Q9BY11 444 aa4□□□□□ -1.77
MCF2-210ENST00000536274 DRC3Q9H069 523 aa4□□□□□ -1.77
MCF2-210ENST00000536274 KCNK9Q9NPC2 374 aa4□□□□□ -1.77
MCF2-210ENST00000536274 KRT82Q9NSB4 513 aa4□□□□□ -1.77
MCF2-210ENST00000536274 CROTQ9UKG9 612 aa4□□□□□ -1.77
MCF2-210ENST00000536274 PCDHA13Q9Y5I0 950 aa4□□□□□ -1.77
MCF2-210ENST00000536274 TRIM64CA6NLI5 447 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 E7ENQ6 273 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 POLRMTO00411 1230 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 ADCY3O60266 1144 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 ZNF862O60290 1169 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 DKC1O60832 514 aaKnown RBP eCLIP3.99□□□□□ -1.77
MCF2-210ENST00000536274 PALMO75781 387 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PDE5AO76074 875 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 HARSP12081 509 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 ZFXP17010 805 aaPredicted RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 ENDOUP21128 410 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 EIF4A3P38919 411 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 TXKP42681 527 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 SLC1A4P43007 532 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 CD97P48960 835 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 ITIH4Q14624 930 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 EXOC3L4Q17RC7 722 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 SLC4A8Q2Y0W8 1093 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 TCP11X2Q5H9J9 407 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 METTL21CQ5VZV1 264 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 RBM44Q6ZP01 1051 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 IRF2BP1Q8IU81 584 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 GABPB2Q8TAK5 448 aaPredicted RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 ACTRT1Q8TDG2 376 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 ATP8B4Q8TF62 1192 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 TPK1Q9H3S4 243 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 KCNQ5Q9NR82 932 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 FAM207AQ9NSI2 230 aaPredicted RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 TCP11L1Q9NUJ3 509 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 CWC25Q9NXE8 425 aaPredicted RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 ARHGAP20Q9P2F6 1191 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 SEC63Q9UGP8 760 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 NARFQ9UHQ1 456 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 NR2E1Q9Y466 385 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 CTDP1Q9Y5B0 961 aaPredicted RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 MED23Q9ULK4 1368 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PI4KAP2A4QPH2 592 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 GNAT3A8MTJ3 354 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 TMX2-CTNND1H3BSU7 103 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 ASAP2O43150 1006 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 TIMM44O43615 452 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PRC1O43663 620 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 BAG2O95816 211 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PAEPP09466 180 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 ATP6V1B1P15313 513 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 FGFR4P22455 802 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 STIP1P31948 543 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 CPA2P48052 419 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 GPSM2P81274 684 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 EXOSC10Q01780 885 aaKnown RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 MPP2Q14168 576 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 SEPT2Q15019 361 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 ZCWPW2Q504Y3 356 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 ACSBG2Q5FVE4 666 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 TBC1D9BQ66K14 1250 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 IZUMO2Q6UXV1 221 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 LRRC74BQ6ZQY2 392 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PRR23CQ6ZRP0 262 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 LDHDQ86WU2 507 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 MICU3Q86XE3 530 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 MB21D1Q8N884 522 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PI4KAP1Q8N8J0 262 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PPP1R14BQ96C90 147 aa3.99□□□□□ -1.77
MCF2-210ENST00000536274 PRR11Q96HE9 360 aaPredicted RBP3.99□□□□□ -1.77
MCF2-210ENST00000536274 SNX27Q96L92 541 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms