RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 NFX1Q12986 1120 aaKnown RBP12.6□□□□□ -0.39
CDCA3-206ENST00000536241 FBXO47Q5MNV8 452 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 ATF7IP2Q5U623 682 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 EEF1DP3Q658K8 133 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 SLFN12LQ6IEE8 588 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 ARMCX5Q6P1M9 558 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 FOXR2Q6PJQ5 311 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 ZPBP2Q6X784 338 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 TSHZ1Q6ZSZ6 1077 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 FILIP1Q7Z7B0 1213 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 FAM228AQ86W67 206 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 IRF2BP1Q8IU81 584 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 RDH13Q8NBN7 331 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 ZSWIM2Q8NEG5 633 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 GOLGA5Q8TBA6 731 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 POMGNT1Q8WZA1 660 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 ABHD8Q96I13 439 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 PRIMPOLQ96LW4 560 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 HAPLN2Q9GZV7 340 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 TMEM39AQ9NV64 488 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 DMAC2Q9NW81 257 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 CGNQ9P2M7 1197 aaKnown RBP12.6□□□□□ -0.39
CDCA3-206ENST00000536241 ST3GAL5Q9UNP4 418 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 TNFSF13BQ9Y275 285 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 STYXL1Q9Y6J8 313 aa12.6□□□□□ -0.39
CDCA3-206ENST00000536241 A0A1B0GUA9 196 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 GOLGA8IPA6NC78 632 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 GOLGA6L3A6NEY3 463 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 GOLGA8JA6NMD2 632 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CLDN3O15551 220 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 TOM1L1O75674 476 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 GHRP10912 638 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 SELPP16109 830 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CDK11BP21127 795 aaKnown RBP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 SFPQP23246 707 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CASP4P49662 377 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 RBL2Q08999 1139 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 LPIN1Q14693 890 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 PCBP1Q15365 356 aaKnown RBP eCLIP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 NFIL3Q16649 462 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CEP135Q66GS9 1140 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 LRRC55Q6ZSA7 311 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 ZBTB33Q86T24 672 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 SLC9A9Q8IVB4 645 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 C12orf56Q8IXR9 622 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CCDC155Q8N6L0 562 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 NOC3LQ8WTT2 800 aaKnown RBP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 NOC4LQ9BVI4 516 aaKnown RBP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 PPP1R12CQ9BZL4 782 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 HIPK3Q9H422 1215 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 PTPRHQ9HD43 1115 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 HSPBP1Q9NZL4 362 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 ANKFY1Q9P2R3 1169 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 UMODL1Q5DID0 1318 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 A0A0B4J269 797 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 FSD2A1L4K1 749 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 ABLIM1O14639 778 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 GPR182O15218 404 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 EXOC3O60645 756 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 AKAP3O75969 853 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 FGFR1OPO95684 399 aaKnown RBP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CLTBP09497 229 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 ATP1A3P13637 1013 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 GARTP22102 1010 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 PROZP22891 400 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CD52P31358 61 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CCL23P55773 120 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 MYBPC2Q14324 1141 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 MBTPS1Q14703 1052 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 GPNMBQ14956 572 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 LRRC8DQ7L1W4 858 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 ZC3H3Q8IXZ2 948 aaKnown RBP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 XXYLT1Q8NBI6 393 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 SAAL1Q96ER3 474 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CEP63Q96MT8 703 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 THAP9Q9H5L6 903 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 PDZD7Q9H5P4 517 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 AGO2Q9UKV8 859 aaKnown RBP12.59□□□□□ -0.39
CDCA3-206ENST00000536241 PADI3Q9ULW8 664 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 SQORQ9Y6N5 450 aa12.59□□□□□ -0.39
CDCA3-206ENST00000536241 CNTNAP2Q9UHC6 1331 aa12.58□□□□□ -0.39
CDCA3-206ENST00000536241 CCDC85CA6NKD9 419 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 HARSP12081 509 aaKnown RBP12.58□□□□□ -0.4
CDCA3-206ENST00000536241 ZNF18P17022 549 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 AXLP30530 894 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 CYP2C18P33260 490 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 TPM4P67936 248 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 PLCB2Q00722 1185 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 MCL1Q07820 350 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 UVSSAQ2YD98 709 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 SEZ6Q53EL9 994 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 CDKAL1Q5VV42 579 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 MPZL3Q6UWV2 235 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 USP38Q8NB14 1042 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 TMEM174Q8WUU8 243 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 SCLYQ96I15 445 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 MSTO1Q9BUK6 570 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 ERVK-5Q9HDB9 667 aa12.58□□□□□ -0.4
CDCA3-206ENST00000536241 AGPAT5Q9NUQ2 364 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms