RNA–Protein interactions for RNA: ENST00000535818.1

VPS37C-202, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 865 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-202ENST00000535818 SPIRE2Q8WWL2 714 aa24.46■■□□□ 1.51
VPS37C-202ENST00000535818 ZHX3Q9H4I2 956 aa24.46■■□□□ 1.51
VPS37C-202ENST00000535818 TMEM134Q9H6X4 195 aa24.46■■□□□ 1.51
VPS37C-202ENST00000535818 CWH43Q9H720 699 aa24.46■■□□□ 1.51
VPS37C-202ENST00000535818 ARHGAP28Q9P2N2 729 aa24.46■■□□□ 1.51
VPS37C-202ENST00000535818 CHD7Q9P2D1 2997 aa24.45■■□□□ 1.51
VPS37C-202ENST00000535818 NAALADL2Q58DX5 795 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 NOMO2Q5JPE7 1267 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 COLGALT1Q8NBJ5 622 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 P2RX5Q93086 422 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 PDZD7Q9H5P4 517 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 UBN1Q9NPG3 1134 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 USP20Q9Y2K6 914 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 HES2Q9Y543 173 aa24.45■■□□□ 1.5
VPS37C-202ENST00000535818 TTLL13PA6NNM8 815 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 OFD1O75665 1012 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 EDN1P05305 212 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 RNASELQ05823 741 aaKnown RBP24.44■■□□□ 1.5
VPS37C-202ENST00000535818 STRN3Q13033 797 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 GIT2Q14161 759 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 CSPP1Q1MSJ5 1256 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 LRRC55Q6ZSA7 311 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 THNSL1Q8IYQ7 743 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 MYCT1Q8N699 235 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 KLHL23Q8NBE8 558 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 MRPL38Q96DV4 380 aaKnown RBP24.44■■□□□ 1.5
VPS37C-202ENST00000535818 ZNF558Q96NG5 402 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 NXF3Q9H4D5 531 aaKnown RBP24.44■■□□□ 1.5
VPS37C-202ENST00000535818 PARVGQ9HBI0 331 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 PCDHA7Q9UN72 937 aa24.44■■□□□ 1.5
VPS37C-202ENST00000535818 A0A087X0B3 334 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 H0YCG3 227 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 CSPG5O95196 566 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 ATF7IP2Q5U623 682 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 SHC4Q6S5L8 630 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 DYMQ7RTS9 669 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 APBB1IPQ7Z5R6 666 aaPredicted RBP24.43■■□□□ 1.5
VPS37C-202ENST00000535818 SPATA32Q96LK8 384 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 NTPCRQ9BSD7 190 aaKnown RBP24.43■■□□□ 1.5
VPS37C-202ENST00000535818 MRPL4Q9BYD3 311 aaKnown RBP24.43■■□□□ 1.5
VPS37C-202ENST00000535818 LMAN2LQ9H0V9 348 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 ALG13Q9NP73 1137 aaKnown RBP24.43■■□□□ 1.5
VPS37C-202ENST00000535818 FAM13BQ9NYF5 915 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 RCOR1Q9UKL0 485 aa24.43■■□□□ 1.5
VPS37C-202ENST00000535818 GRM6O15303 877 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 NUCB2P80303 420 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 SKIV2LQ15477 1246 aaKnown RBP24.42■■□□□ 1.5
VPS37C-202ENST00000535818 DCAF4L1Q3SXM0 396 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 AXDND1Q5T1B0 1012 aaPredicted RBP24.42■■□□□ 1.5
VPS37C-202ENST00000535818 NT5DC1Q5TFE4 455 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 GBP3Q9H0R5 595 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 RNF39Q9H2S5 420 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 TBC1D13Q9NVG8 400 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 PARP2Q9UGN5 583 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 PLAGL2Q9UPG8 496 aa24.42■■□□□ 1.5
VPS37C-202ENST00000535818 K7ENM7 598 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 ZC3H11AO75152 810 aaKnown RBP eCLIP24.41■■□□□ 1.5
VPS37C-202ENST00000535818 ITGB1P05556 798 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 MLH1P40692 756 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 NCKAP1LP55160 1127 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 TIGD5Q53EQ6 642 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 EEF1DP3Q658K8 133 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 KCNT2Q6UVM3 1135 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 TAS1R3Q7RTX0 852 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 TMEM161BQ8NDZ6 487 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 DDX12PQ92771 950 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 DHX58Q96C10 678 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 CHAMP1Q96JM3 812 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 FAM193BQ96PV7 902 aaPredicted RBP24.41■■□□□ 1.5
VPS37C-202ENST00000535818 KANSL3Q9P2N6 904 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 GIT1Q9Y2X7 761 aa24.41■■□□□ 1.5
VPS37C-202ENST00000535818 TRAK2O60296 914 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 FGF18O76093 207 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 MAPTP10636 758 aaKnown RBP24.4■■□□□ 1.5
VPS37C-202ENST00000535818 AKAP5P24588 427 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 PPM1AP35813 382 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 PBX3P40426 434 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 ZNF131P52739 623 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 LEO1Q8WVC0 666 aaPredicted RBP24.4■■□□□ 1.5
VPS37C-202ENST00000535818 GAD1Q99259 594 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 TNFSF13BQ9Y275 285 aa24.4■■□□□ 1.5
VPS37C-202ENST00000535818 MYMKA6NI61 221 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 POMCP01189 267 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 ALDH7A1P49419 539 aaKnown RBP24.39■■□□□ 1.49
VPS37C-202ENST00000535818 ZNF568Q3ZCX4 644 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 HAUS6Q7Z4H7 955 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 FAM178BQ8IXR5 827 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 IQUBQ8NA54 791 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 SPPL3Q8TCT6 385 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 POF1BQ8WVV4 589 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 BICD1Q96G01 975 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 RPS6KC1Q96S38 1066 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 ACO2Q99798 780 aaKnown RBP24.39■■□□□ 1.49
VPS37C-202ENST00000535818 TCHPQ9BT92 498 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 TARS2Q9BW92 718 aaKnown RBP24.39■■□□□ 1.49
VPS37C-202ENST00000535818 CUEDC2Q9H467 287 aa24.39■■□□□ 1.49
VPS37C-202ENST00000535818 PRRC2BQ5JSZ5 2229 aaKnown RBP24.39■■□□□ 1.49
VPS37C-202ENST00000535818 CARNS1A5YM72 827 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 ARL5CA6NH57 179 aa24.38■■□□□ 1.49
VPS37C-202ENST00000535818 SCNN1GP51170 649 aa24.38■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms