RNA–Protein interactions for RNA: ENST00000535375.1

PRKDC-205, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 464 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-205ENST00000535375 GOLGA6L6A8MZA4 724 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 PHF2O75151 1096 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 STC2O76061 302 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 CTSSP25774 331 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 ZXDAP98168 799 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 SRSF2Q01130 221 aaKnown RBP6.97□□□□□ -1.29
PRKDC-205ENST00000535375 FOXE3Q13461 319 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 RRP1BQ14684 758 aaKnown RBP6.97□□□□□ -1.29
PRKDC-205ENST00000535375 MUM1Q2TAK8 710 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 FAM214AQ32MH5 1076 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 BTNL9Q6UXG8 535 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 APBB1IPQ7Z5R6 666 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-205ENST00000535375 FAM83AQ86UY5 434 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 ORAI2Q96SN7 254 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 ZNF747Q9BV97 191 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 ACE2Q9BYF1 805 aaPredicted RBP6.97□□□□□ -1.29
PRKDC-205ENST00000535375 PUS7LQ9H0K6 701 aaKnown RBP6.97□□□□□ -1.29
PRKDC-205ENST00000535375 PARPBPQ9NWS1 579 aa6.97□□□□□ -1.29
PRKDC-205ENST00000535375 KRTAP23-1A1A580 65 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 AKR1B10O60218 316 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 TMEM127O75204 238 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 GASTP01350 101 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 HSP90B1P14625 803 aaKnown RBP6.96□□□□□ -1.3
PRKDC-205ENST00000535375 CANXP27824 592 aaKnown RBP6.96□□□□□ -1.3
PRKDC-205ENST00000535375 GPR3P46089 330 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 SCNN1GP51170 649 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 SLC5A3P53794 718 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 APBA1Q02410 837 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 MRPL49Q13405 166 aaKnown RBP6.96□□□□□ -1.3
PRKDC-205ENST00000535375 Q6ZRM9 215 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 PDZD4Q76G19 769 aaPredicted RBP6.96□□□□□ -1.3
PRKDC-205ENST00000535375 NECAB2Q7Z6G3 386 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 CNTD1Q8N815 330 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 MDGA1Q8NFP4 955 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 IL17DQ8TAD2 202 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 RIN2Q8WYP3 895 aaPredicted RBP6.96□□□□□ -1.3
PRKDC-205ENST00000535375 PGBD4Q96DM1 585 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 ENKD1Q9H0I2 346 aa6.96□□□□□ -1.3
PRKDC-205ENST00000535375 PLSCR1O15162 318 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 ITGA10O75578 1167 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 TACR2P21452 398 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 MUM1L1Q5H9M0 696 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 USP51Q70EK9 711 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 TMPRSS6Q8IU80 811 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 TSPEARQ8WU66 669 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 ZNF480Q8WV37 535 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 MNTQ99583 582 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 TMPRSS5Q9H3S3 457 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 CCM2LQ9NUG4 571 aaPredicted RBP6.95□□□□□ -1.3
PRKDC-205ENST00000535375 GPRC5DQ9NZD1 345 aa6.95□□□□□ -1.3
PRKDC-205ENST00000535375 C6P13671 934 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 HK1P19367 917 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 CDK11BP21127 795 aaKnown RBP6.94□□□□□ -1.3
PRKDC-205ENST00000535375 ADSLP30566 484 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-205ENST00000535375 GUCY2FP51841 1108 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 ERVK-21P61565 698 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 PTH1RQ03431 593 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 KLF1Q13351 362 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-205ENST00000535375 CLUL1Q15846 466 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 ADRM1Q16186 407 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 ANO4Q32M45 955 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 GJC2Q5T442 439 aaPredicted RBP6.94□□□□□ -1.3
PRKDC-205ENST00000535375 KCNK18Q7Z418 384 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 GPR156Q8NFN8 814 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 ZNF503Q96F45 646 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 MENTQ9BUN1 341 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 ADI1Q9BV57 179 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 GREM2Q9H772 168 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 CLCA2Q9UQC9 943 aa6.94□□□□□ -1.3
PRKDC-205ENST00000535375 K7ESF4 209 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 CFBP00751 764 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 C1SP09871 688 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 PER3P56645 1201 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 LSM12Q3MHD2 195 aaKnown RBP6.93□□□□□ -1.3
PRKDC-205ENST00000535375 DCAF17Q5H9S7 520 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-205ENST00000535375 MIIPQ5JXC2 388 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 CRIP3Q6Q6R5 217 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 MDM1Q8TC05 714 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 UHRF1Q96T88 793 aaPredicted RBP6.93□□□□□ -1.3
PRKDC-205ENST00000535375 PDCD2LQ9BRP1 358 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 XDHP47989 1333 aa6.93□□□□□ -1.3
PRKDC-205ENST00000535375 PRR5-ARHGAP8B1AHC4 643 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 FZD7O75084 574 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 FSHBP01225 129 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 OSMP13725 252 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 ECHS1P30084 290 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 CRHR1P34998 444 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 PTPN7P35236 360 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 GDF5P43026 501 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 RABGGTBP53611 331 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 DGCR2P98153 550 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 ITKQ08881 620 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 MBNL2Q5VZF2 373 aaKnown RBP6.92□□□□□ -1.3
PRKDC-205ENST00000535375 PGM2L1Q6PCE3 622 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 ZCRB1Q8TBF4 217 aaKnown RBP6.92□□□□□ -1.3
PRKDC-205ENST00000535375 FAM193BQ96PV7 902 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-205ENST00000535375 ZNF703Q9H7S9 590 aaPredicted RBP6.92□□□□□ -1.3
PRKDC-205ENST00000535375 SPON1Q9HCB6 807 aa6.92□□□□□ -1.3
PRKDC-205ENST00000535375 RBM12Q9NTZ6 932 aaKnown RBP6.92□□□□□ -1.3
PRKDC-205ENST00000535375 GPR45Q9Y5Y3 372 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms