RNA–Protein interactions for RNA: ENST00000535202.1

SFSWAP-202, Transcript of splicing factor SWAP, humanhuman

TSL 2

Gene SFSWAP, Length 567 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-202ENST00000535202 POTEGQ6S5H5 508 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 MRPL10Q7Z7H8 261 aaKnown RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 ZNF280BQ86YH2 543 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 VPS52Q8N1B4 723 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 TMEM87AQ8NBN3 555 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 SMG8Q8ND04 991 aaKnown RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 BCL7CQ8WUZ0 217 aaPredicted RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 IGSF21Q96ID5 467 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 FAM193BQ96PV7 902 aaPredicted RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 POLR3CQ9BUI4 534 aaPredicted RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 APOL6Q9BWW8 343 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 APOL5Q9BWW9 433 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 EIF2AQ9BY44 585 aaKnown RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 TRIM6Q9C030 488 aaPredicted RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 C11orf16Q9NQ32 467 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 DNAJB4Q9UDY4 337 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 DBR1Q9UK59 544 aaKnown RBP9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 IPPQ9Y573 584 aa9.47□□□□□ -0.89
SFSWAP-202ENST00000535202 TDRD15B5MCY1 1934 aaKnown RBP9.46□□□□□ -0.89
SFSWAP-202ENST00000535202 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 ARHGEF35A5YM69 484 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CARNS1A5YM72 827 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 B4GALT3O60512 393 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 GPR37L1O60883 481 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 DDHD2O94830 711 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CXCL14O95715 111 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 ARF4P18085 180 aaPredicted RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 RPA1P27694 616 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CCT6AP40227 531 aaKnown RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 MLH1P40692 756 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 AFF1P51825 1210 aaKnown RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 POU5F1BQ06416 359 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 KCNC3Q14003 757 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 PCBP1Q15365 356 aaKnown RBP eCLIP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 AMHR2Q16671 573 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 HAUS3Q68CZ6 603 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 TMEM184AQ6ZMB5 413 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 DDX53Q86TM3 631 aaKnown RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CDR2LQ86X02 465 aaPredicted RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 IFNLR1Q8IU57 520 aaPredicted RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 ZBTB8OSQ8IWT0 167 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 MRPL43Q8N983 215 aaKnown RBP9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CNNM3Q8NE01 707 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 MCPH1Q8NEM0 835 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 AUTS2Q8WXX7 1259 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CASP10Q92851 521 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CCDC51Q96ER9 411 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 NACC1Q96RE7 527 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 ZBP1Q9H171 429 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 CSRNP2Q9H175 543 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 UBN1Q9NPG3 1134 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 KANSL3Q9P2N6 904 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 MUTYHQ9UIF7 546 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 HES2Q9Y543 173 aa9.46□□□□□ -0.9
SFSWAP-202ENST00000535202 B4GALT5O43286 388 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 CLASP2O75122 1294 aaKnown RBP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 NPTXRO95502 500 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 ALDH2P05091 517 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 SSBP05455 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 CTSAP10619 480 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 LIG1P18858 919 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 MSNP26038 577 aaKnown RBP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 U2AF2P26368 475 aaKnown RBP eCLIP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 FXR2P51116 673 aaKnown RBP eCLIP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 ECM1Q16610 540 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 TMEM132AQ24JP5 1023 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 MCTP1Q6DN14 999 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 SYCE2Q6PIF2 218 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 PADI6Q6TGC4 694 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 RNF135Q8IUD6 432 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 HACE1Q8IYU2 909 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 C4orf32Q8N8J7 132 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 RPGRIP1Q96KN7 1286 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 GAD1Q99259 594 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 TMEM175Q9BSA9 504 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 PHF7Q9BWX1 381 aaPredicted RBP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 NFKBIZQ9BYH8 718 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 RNF39Q9H2S5 420 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 NXF3Q9H4D5 531 aaKnown RBP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 PRMT7Q9NVM4 692 aaPredicted RBP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 FAN1Q9Y2M0 1017 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 PRG3Q9Y2Y8 225 aaPredicted RBP9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 HCN4Q9Y3Q4 1203 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 KIF3AQ9Y496 699 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 PCDHB6Q9Y5E3 794 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 HCFC2Q9Y5Z7 792 aa9.45□□□□□ -0.9
SFSWAP-202ENST00000535202 ARL5CA6NH57 179 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 LOC730098B7Z3J9 87 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 NRP1O14786 923 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 CD2BP2O95400 341 aaKnown RBP9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 HOXB8P17481 243 aaPredicted RBP9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 CYP11B2P19099 503 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 MUTP22033 750 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 SP100P23497 879 aaPredicted RBP9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 AKAP5P24588 427 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 OR1G1P47890 313 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 TOB1P50616 345 aaPredicted RBP9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 SCNN1GP51170 649 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 PTGDRQ13258 359 aa9.44□□□□□ -0.9
SFSWAP-202ENST00000535202 GIT2Q14161 759 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms