RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 ZNF720Q7Z2F6 126 aa22.58■■□□□ 1.21
CHFR-209ENST00000535181 PGBD4Q96DM1 585 aa22.58■■□□□ 1.21
CHFR-209ENST00000535181 CCDC34Q96HJ3 373 aa22.58■■□□□ 1.21
CHFR-209ENST00000535181 STRA6Q9BX79 667 aa22.58■■□□□ 1.21
CHFR-209ENST00000535181 GTPBP6O43824 516 aaPredicted RBP22.57■■□□□ 1.2
CHFR-209ENST00000535181 PPP1R37O75864 691 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 PIGRP01833 764 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 CA3P07451 260 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 MYOGP15173 224 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 LIG1P18858 919 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 AFMP43652 599 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 EHHADHQ08426 723 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 COASYQ13057 564 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 ALCAMQ13740 583 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 ATF7IP2Q5U623 682 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 KANK3Q6NY19 840 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 CMTR2Q8IYT2 770 aaKnown RBP22.57■■□□□ 1.2
CHFR-209ENST00000535181 ACO2Q99798 780 aaKnown RBP22.57■■□□□ 1.2
CHFR-209ENST00000535181 EIF2AQ9BY44 585 aaKnown RBP22.57■■□□□ 1.2
CHFR-209ENST00000535181 MRPL44Q9H9J2 332 aaKnown RBP22.57■■□□□ 1.2
CHFR-209ENST00000535181 PTPRHQ9HD43 1115 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 RNF19AQ9NV58 838 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 TBX20Q9UMR3 447 aa22.57■■□□□ 1.2
CHFR-209ENST00000535181 FNDC1Q4ZHG4 1894 aaPredicted RBP22.56■■□□□ 1.2
CHFR-209ENST00000535181 ZMYM2Q9UBW7 1377 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 PROZP22891 400 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 NMT1P30419 496 aaKnown RBP22.56■■□□□ 1.2
CHFR-209ENST00000535181 UBE2HP62256 183 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 CUL4BQ13620 913 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 DCAF4L1Q3SXM0 396 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 APBB1IPQ7Z5R6 666 aaPredicted RBP22.56■■□□□ 1.2
CHFR-209ENST00000535181 MAP4K3Q8IVH8 894 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 SMG8Q8ND04 991 aaKnown RBP22.56■■□□□ 1.2
CHFR-209ENST00000535181 TIGD1Q96MW7 591 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 ADPGKQ9BRR6 497 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 TRIM6Q9C030 488 aaPredicted RBP22.56■■□□□ 1.2
CHFR-209ENST00000535181 TMEM117Q9H0C3 514 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 NKX2-4Q9H2Z4 354 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 SLC28A3Q9HAS3 691 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 IPPQ9Y573 584 aa22.56■■□□□ 1.2
CHFR-209ENST00000535181 LCHNA4D1U4 455 aa22.55■■□□□ 1.2
CHFR-209ENST00000535181 TMEM132AQ24JP5 1023 aa22.55■■□□□ 1.2
CHFR-209ENST00000535181 TPRNQ4KMQ1 711 aa22.55■■□□□ 1.2
CHFR-209ENST00000535181 GRAMD1CQ8IYS0 662 aa22.55■■□□□ 1.2
CHFR-209ENST00000535181 HACE1Q8IYU2 909 aa22.55■■□□□ 1.2
CHFR-209ENST00000535181 TARS2Q9BW92 718 aaKnown RBP22.55■■□□□ 1.2
CHFR-209ENST00000535181 BLZF1Q9H2G9 400 aa22.55■■□□□ 1.2
CHFR-209ENST00000535181 UBN1Q9NPG3 1134 aa22.55■■□□□ 1.2
CHFR-209ENST00000535181 LINC01553A4QN01 128 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 ABLIM1O14639 778 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 GADD45BO75293 160 aaPredicted RBP22.54■■□□□ 1.2
CHFR-209ENST00000535181 TOM1L1O75674 476 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 NPTXRO95502 500 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 FGFR1P11362 822 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 CLLU1OSQ5K130 101 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 EEF1DP3Q658K8 133 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 PPP2R2DQ66LE6 453 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 CDR2LQ86X02 465 aaPredicted RBP22.54■■□□□ 1.2
CHFR-209ENST00000535181 ELOA2Q8IYF1 753 aaPredicted RBP22.54■■□□□ 1.2
CHFR-209ENST00000535181 GBP4Q96PP9 640 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 USP20Q9Y2K6 914 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 PCDHB13Q9Y5F0 798 aa22.54■■□□□ 1.2
CHFR-209ENST00000535181 INPPL1O15357 1258 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 KLRC4O43908 158 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 CASP1P29466 404 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 TAP1Q03518 808 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 BTG3Q14201 252 aaPredicted RBP22.53■■□□□ 1.2
CHFR-209ENST00000535181 ZNF697Q5TEC3 545 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 MPZL3Q6UWV2 235 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 AGMOQ6ZNB7 445 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 STXBP4Q6ZWJ1 553 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 ABI1Q8IZP0 508 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 RNF169Q8NCN4 708 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 CASD1Q96PB1 797 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 NXF3Q9H4D5 531 aaKnown RBP22.53■■□□□ 1.2
CHFR-209ENST00000535181 RALGAPA2Q2PPJ7 1873 aa22.53■■□□□ 1.2
CHFR-209ENST00000535181 CHD9Q3L8U1 2897 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 NR1I2O75469 434 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 ARHGEF15O94989 841 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 GCNT3O95395 438 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 MCF2P10911 925 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 ITGA4P13612 1032 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 IBSPP21815 317 aaPredicted RBP22.52■■□□□ 1.2
CHFR-209ENST00000535181 CASP5P51878 434 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 DPYDQ12882 1025 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 ZNF568Q3ZCX4 644 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 ZC2HC1CQ53FD0 456 aaPredicted RBP22.52■■□□□ 1.2
CHFR-209ENST00000535181 FAM26FQ5R3K3 315 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 L1TD1Q5T7N2 865 aaKnown RBP22.52■■□□□ 1.2
CHFR-209ENST00000535181 GLB1LQ6UWU2 654 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 FIBCD1Q8N539 461 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 CLP1Q92989 425 aaKnown RBP22.52■■□□□ 1.2
CHFR-209ENST00000535181 LPPQ93052 612 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 SAMD11Q96NU1 681 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 MRPL9Q9BYD2 267 aaKnown RBP22.52■■□□□ 1.2
CHFR-209ENST00000535181 CDT1Q9H211 546 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 ZNF576Q9H609 170 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 RSAD1Q9HA92 442 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 TBC1D7Q9P0N9 293 aa22.52■■□□□ 1.2
CHFR-209ENST00000535181 GIT1Q9Y2X7 761 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms