RNA–Protein interactions for RNA: ENST00000534753.5

CCDC90B-219, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-219ENST00000534753 SAMD11Q96NU1 681 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 MTMR9Q96QG7 549 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 CEP89Q96ST8 783 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 ALG13Q9NP73 1137 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 C1orf112Q9NSG2 853 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 PIN4Q9Y237 131 aaKnown RBP9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 PCDHGA11Q9Y5H2 935 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 COL4A3BPQ9Y5P4 624 aa9.95□□□□□ -0.82
CCDC90B-219ENST00000534753 IGKV6-21A0A0C4DH24 114 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 SFI1A8K8P3 1242 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 C9IYK1 514 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 H3BNC9 293 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 ERVH48-1M5A8F1 160 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 GRM6O15303 877 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 USO1O60763 962 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 SFPQP23246 707 aaKnown RBP eCLIP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 SCNN1AP37088 669 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 RPIAP49247 311 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 MCM2P49736 904 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 MRPS5P82675 430 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 CDC42EP1Q00587 391 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 KCNA1Q09470 495 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 LAMTOR4Q0VGL1 99 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 DSC3Q14574 896 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 ZRSR1Q15695 479 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 PHLDB3Q6NSJ2 640 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 EXOC8Q8IYI6 725 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 CMTR2Q8IYT2 770 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 ERMNQ8TAM6 284 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 TCP11Q8WWU5 503 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 PSPC1Q8WXF1 523 aaKnown RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 ZNF689Q96CS4 500 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 HSD17B14Q9BPX1 270 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 C11orf84Q9BUA3 381 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 COL25A1Q9BXS0 654 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 INO80BQ9C086 356 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 IGFLR1Q9H665 355 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 RWDD3Q9Y3V2 267 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 PCDHB6Q9Y5E3 794 aa9.94□□□□□ -0.82
CCDC90B-219ENST00000534753 MED24O75448 989 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 LIG1P18858 919 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 POU3F3P20264 500 aaPredicted RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 CCT6AP40227 531 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 TOB1P50616 345 aaPredicted RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 KCNQ1P51787 676 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 LARP1BQ659C4 914 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 ZNF410Q86VK4 478 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 CATSPER3Q86XQ3 398 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 ECHDC2Q86YB7 292 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 KLHL23Q8NBE8 558 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 RNF149Q8NC42 400 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 TPCN2Q8NHX9 752 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 NEK9Q8TD19 979 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 HELQQ8TDG4 1101 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 MICAL1Q8TDZ2 1067 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 ATXN2LQ8WWM7 1075 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 LPPQ93052 612 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 MRPL38Q96DV4 380 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 ASB2Q96Q27 587 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 BACH2Q9BYV9 841 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 DHX33Q9H6R0 707 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 RC3H2Q9HBD1 1191 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 POLD4Q9HCU8 107 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 TMPRSS4Q9NRS4 437 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 TYW1Q9NV66 732 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 TMEM161AQ9NX61 479 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 DACT1Q9NYF0 836 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 LMCD1Q9NZU5 365 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 LRWD1Q9UFC0 647 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 CDV3Q9UKY7 258 aaKnown RBP9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 PCDHB12Q9Y5F1 795 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 NLRC5Q86WI3 1866 aa9.93□□□□□ -0.82
CCDC90B-219ENST00000534753 TRANK1O15050 2925 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 VPS37CA5D8V6 355 aaPredicted RBP9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 ARHGEF35A5YM69 484 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 INO80B-WBP1J3KQ70 363 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 ERLIN2O94905 339 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 STAU1O95793 577 aaKnown RBP9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 RB1P06400 928 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 SPATA31C1P0DKV0 1188 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 FSHRP23945 695 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 U2AF2P26368 475 aaKnown RBP eCLIP9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 CA8P35219 290 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 PBX3P40426 434 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 PHKA2P46019 1235 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 TRAPPC10P48553 1259 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 ATP1A2P50993 1020 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 FAM189BP81408 668 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 TFDP1Q14186 410 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 TCEAL5Q5H9L2 206 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 FERMT3Q86UX7 667 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 THNSL1Q8IYQ7 743 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 CRIPAKQ8N1N5 446 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 CLP1Q92989 425 aaKnown RBP9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 NACC1Q96RE7 527 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 GBP3Q9H0R5 595 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 POLR3FQ9H1D9 316 aaPredicted RBP9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 MINDY3Q9H8M7 445 aa9.92□□□□□ -0.82
CCDC90B-219ENST00000534753 IFT122Q9HBG6 1241 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms