RNA–Protein interactions for RNA: ENST00000534172.1

CSMD3-210, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 5

Gene CSMD3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-210ENST00000534172 MTSS1O43312 755 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 SH3BP5O60239 455 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 NOBOXO60393 691 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 SEC24DO94855 1032 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-210ENST00000534172 ADCY8P40145 1251 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 LGALS4P56470 323 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 GAGE13Q4V321 117 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 PITRM1Q5JRX3 1037 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 TMEM240Q5SV17 173 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 PHF19Q5T6S3 580 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 MBNL2Q5VZF2 373 aaKnown RBP4.4□□□□□ -1.71
CSMD3-210ENST00000534172 USP30Q70CQ3 517 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 PNMA8AQ86V59 439 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-210ENST00000534172 UIMC1Q96RL1 719 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 SYT3Q9BQG1 590 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 SPATA25Q9BR10 227 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 SARGQ9BW04 601 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 SEMA4AQ9H3S1 761 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 IFT122Q9HBG6 1241 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 CCM2LQ9NUG4 571 aaPredicted RBP4.4□□□□□ -1.71
CSMD3-210ENST00000534172 TMPRSS11EQ9UL52 423 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 ZDHHC9Q9Y397 364 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 SLC4A7Q9Y6M7 1214 aa4.4□□□□□ -1.71
CSMD3-210ENST00000534172 NRP1O14786 923 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 MTNR1BP49286 362 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 SLC16A1P53985 500 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 ODF1Q14990 250 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 C19orf54Q5BKX5 351 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 IL31Q6EBC2 164 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 BTNL9Q6UXG8 535 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 EPM2AIP1Q7L775 607 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 C1QL4Q86Z23 238 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 GCDHQ92947 438 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 NKD2Q969F2 451 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 CLIP3Q96DZ5 547 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 ACE2Q9BYF1 805 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 SLC6A15Q9H2J7 730 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 GOLGA2P5Q9HBQ8 144 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 ANLNQ9NQW6 1124 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 ZNF277Q9NRM2 450 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 PNMA2Q9UL42 364 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 GIT1Q9Y2X7 761 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 LAS1LQ9Y4W2 734 aaKnown RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 ARHGAP6O43182 974 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 IFIT2P09913 472 aaKnown RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 LTA4HP09960 611 aaKnown RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 ZSCAN22P10073 491 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 CYP2C19P33261 490 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 NEK3P51956 506 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 WNT3AP56704 352 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 MUM1L1Q5H9M0 696 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 NT5DC1Q5TFE4 455 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 EFCAB2Q5VUJ9 269 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 ARHGEF18Q6ZSZ5 1173 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 TAS1R1Q7RTX1 841 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 KCNK18Q7Z418 384 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 FRMD5Q7Z6J6 570 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 C11orf96Q7Z7L8 435 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 KBTBD2Q8IY47 623 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 MARCH10Q8NA82 808 aaPredicted RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 PJA1Q8NG27 643 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 MBD6Q96DN6 1003 aa4.39□□□□□ -1.71
CSMD3-210ENST00000534172 QRSL1Q9H0R6 528 aaKnown RBP4.39□□□□□ -1.71
CSMD3-210ENST00000534172 NBPF7P0C2Y1 421 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-210ENST00000534172 CLEC2LP0C7M8 214 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 AGXTP21549 392 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 LPOP22079 712 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-210ENST00000534172 MRE11P49959 708 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 GRM3Q14832 879 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 PCOLCEQ15113 449 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 TOR2AQ5JU69 321 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 ZFYVE27Q5T4F4 411 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 AGBL4Q5VU57 503 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 SLC41A1Q8IVJ1 513 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 PLA2G15Q8NCC3 412 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 LRGUKQ96M69 825 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 NUP88Q99567 741 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-210ENST00000534172 ADI1Q9BV57 179 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 NELFAQ9H3P2 528 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 USP25Q9UHP3 1055 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 TAGLN3Q9UI15 199 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 INTUQ9ULD6 942 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 INVSQ9Y283 1065 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 CTDP1Q9Y5B0 961 aaPredicted RBP4.38□□□□□ -1.71
CSMD3-210ENST00000534172 RIMS1Q86UR5 1692 aaKnown RBP4.38□□□□□ -1.71
CSMD3-210ENST00000534172 FAM171A2A8MVW0 826 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 PCDHGA12O60330 932 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 JUNP05412 331 aaKnown RBP4.38□□□□□ -1.71
CSMD3-210ENST00000534172 WASP42768 502 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 PPP2CBP62714 309 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 PPP2CAP67775 309 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 PICALMQ13492 652 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 GTF2H3Q13889 308 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 GBX1Q14549 363 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 CLUL1Q15846 466 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 UNQ6494/PRO21346Q6UXR6 183 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 CLEC14AQ86T13 490 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 CMIPQ8IY22 773 aa4.38□□□□□ -1.71
CSMD3-210ENST00000534172 CMTR2Q8IYT2 770 aaKnown RBP4.38□□□□□ -1.71
CSMD3-210ENST00000534172 NME8Q8N427 588 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms