RNA–Protein interactions for RNA: ENST00000534143.5

CMTM1-220, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 781 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-220ENST00000534143 SELPP16109 830 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 PLCG1P19174 1290 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 UBA1P22314 1058 aaKnown RBP6.84□□□□□ -1.31
CMTM1-220ENST00000534143 SFNP31947 248 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 CCT6AP40227 531 aaKnown RBP6.84□□□□□ -1.31
CMTM1-220ENST00000534143 ACTR2P61160 394 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 NEDD9Q14511 834 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 TTLL4Q14679 1199 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 LY6KQ17RY6 165 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 PRAMEF19Q5SWL8 479 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 CELF3Q5SZQ8 465 aaKnown RBP6.84□□□□□ -1.31
CMTM1-220ENST00000534143 HAUS3Q68CZ6 603 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 IQSEC1Q6DN90 963 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 PHLDB3Q6NSJ2 640 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 METTL7BQ6UX53 244 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 ABHD15Q6UXT9 468 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 CYFIP1Q7L576 1253 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 MIER3Q7Z3K6 550 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 KCNK18Q7Z418 384 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 ATCAYQ86WG3 371 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 DTWD1Q8N5C7 304 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 CNNM3Q8NE01 707 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 ERMNQ8TAM6 284 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 NEK9Q8TD19 979 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 SCFD2Q8WU76 684 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 ZNF296Q8WUU4 475 aaPredicted RBP6.84□□□□□ -1.31
CMTM1-220ENST00000534143 SYAP1Q96A49 352 aaPredicted RBP6.84□□□□□ -1.31
CMTM1-220ENST00000534143 PLD4Q96BZ4 506 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 CALML4Q96GE6 196 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 PAGE5Q96GU1 130 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 ERO1AQ96HE7 468 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 DYDC2Q96IM9 177 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 NSUN5Q96P11 429 aaKnown RBP6.84□□□□□ -1.31
CMTM1-220ENST00000534143 PLIN2Q99541 437 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 NT5C3AQ9H0P0 336 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 RBSNQ9H1K0 784 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 CUEDC2Q9H467 287 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 KBTBD4Q9NVX7 518 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 SLC9A2Q9UBY0 812 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 SRRDQ9UH36 339 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 PCDHA10Q9Y5I2 948 aa6.84□□□□□ -1.31
CMTM1-220ENST00000534143 LOXHD1Q8IVV2 1947 aa6.84□□□□□ -1.32
CMTM1-220ENST00000534143 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 WDR64B1ANS9 1081 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 E9PMD0 336 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 CHMP2AO43633 222 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 LETM1O95202 739 aaPredicted RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 STBD1O95210 358 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 RPLP1P05386 114 aaKnown RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 P4HBP07237 508 aaKnown RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 FURINP09958 794 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 SUPT20HL2P0C7V6 817 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 TXNP10599 105 aaKnown RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 XRCC6P12956 609 aaKnown RBP eCLIP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 HOXD10P28358 340 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 CYP2C19P33261 490 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 ADCYAP1R1P41586 468 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 STAT6P42226 847 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 SARSP49591 514 aaKnown RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 RGS19P49795 217 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 JAK3P52333 1124 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 SOX10P56693 466 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 PSMC6P62333 389 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 PRKCZQ05513 592 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 ARHGAP1Q07960 439 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 CTTNQ14247 550 aaKnown RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 CAMK4Q16566 473 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 ZSCAN23Q3MJ62 389 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 DUSP28Q4G0W2 176 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 TTC39BQ5VTQ0 682 aaPredicted RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 WFDC8Q8IUA0 241 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 C4orf19Q8IY42 314 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 SMAP1Q8IYB5 467 aaPredicted RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 SPATA20Q8TB22 786 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 TRIB2Q92519 343 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 RAD54LQ92698 747 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 COPS5Q92905 334 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 LENG1Q96BZ8 264 aaPredicted RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 PCYT2Q99447 389 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 TNMDQ9H2S6 317 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 MLXIPQ9HAP2 919 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 MAGEF1Q9HAY2 307 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 WRAP73Q9P2S5 460 aaPredicted RBP6.83□□□□□ -1.32
CMTM1-220ENST00000534143 NRBP1Q9UHY1 535 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 TUBE1Q9UJT0 475 aa6.83□□□□□ -1.32
CMTM1-220ENST00000534143 A0A087WWV3 80 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 NKRFO15226 690 aaKnown RBP eCLIP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ADCY6O43306 1168 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 ZNF862O60290 1169 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 SORBS3O60504 671 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 EYA4O95677 639 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 GH1P01241 217 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 PLA2G4BP0C869 781 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 CYBAP13498 195 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 NPR3P17342 541 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 PTGS1P23219 599 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 AFMP43652 599 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 QARSP47897 775 aaKnown RBP6.82□□□□□ -1.32
CMTM1-220ENST00000534143 SLC12A3P55017 1021 aa6.82□□□□□ -1.32
CMTM1-220ENST00000534143 PRMT2P55345 433 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms