RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 SSX2IPQ9Y2D8 614 aa23.8■■□□□ 1.4
SSH3-211ENST00000534112 CCDC195A0A1B0GUA6 201 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 CCDC194A0A1B0GVG4 234 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 TEX28O15482 410 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 GAS2O43903 313 aaKnown RBP23.79■■□□□ 1.4
SSH3-211ENST00000534112 N4BP1O75113 896 aaKnown RBP23.79■■□□□ 1.4
SSH3-211ENST00000534112 ADH1AP07327 375 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 GCFC2P16383 781 aaKnown RBP23.79■■□□□ 1.4
SSH3-211ENST00000534112 OR1G1P47890 313 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 EMC2Q15006 297 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 OTUD6AQ7L8S5 288 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 NEK8Q86SG6 692 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 SIX5Q8N196 739 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 PHF20Q9BVI0 1012 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 EIF2AQ9BY44 585 aaKnown RBP23.79■■□□□ 1.4
SSH3-211ENST00000534112 RNF39Q9H2S5 420 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 IPPQ9Y573 584 aa23.79■■□□□ 1.4
SSH3-211ENST00000534112 ARL5CA6NH57 179 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 ZBTB39O15060 712 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 TBX3O15119 743 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 INPPL1O15357 1258 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 ERLIN2O94905 339 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 EFEMP2O95967 443 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 KIAA0319Q5VV43 1072 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 RNF168Q8IYW5 571 aaPredicted RBP23.78■■□□□ 1.4
SSH3-211ENST00000534112 GAD1Q99259 594 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 RTP3Q9BQQ7 232 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 RHOBTB2Q9BYZ6 727 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 RXFP1Q9HBX9 757 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 WDR6Q9NNW5 1121 aaKnown RBP23.78■■□□□ 1.4
SSH3-211ENST00000534112 DPP7Q9UHL4 492 aa23.78■■□□□ 1.4
SSH3-211ENST00000534112 MARCH6O60337 910 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 CCNT1O60563 726 aaKnown RBP23.77■■□□□ 1.4
SSH3-211ENST00000534112 GLUD1P00367 558 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 DSC1Q08554 894 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 PCBP1Q15365 356 aaKnown RBP eCLIP23.77■■□□□ 1.4
SSH3-211ENST00000534112 XKR9Q5GH70 373 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 CYP26C1Q6V0L0 522 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 CCDC105Q8IYK2 499 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 DYDC2Q96IM9 177 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 ZSWIM4Q9H7M6 989 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 MIOSQ9NXC5 875 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 HES2Q9Y543 173 aa23.77■■□□□ 1.4
SSH3-211ENST00000534112 NARSO43776 548 aaKnown RBP23.76■■□□□ 1.39
SSH3-211ENST00000534112 TSPAN1O60635 241 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 MYBP10242 640 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 AXLP30530 894 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 GBP2P32456 591 aaPredicted RBP23.76■■□□□ 1.39
SSH3-211ENST00000534112 MLH1P40692 756 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 GLUD2P49448 558 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 PTENP60484 403 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 CTTNQ14247 550 aaKnown RBP23.76■■□□□ 1.39
SSH3-211ENST00000534112 NCAPH2Q6IBW4 605 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 NOTUMQ6P988 496 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 ELMSAN1Q6PJG2 1045 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 DTWD2Q8NBA8 298 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 RSAD2Q8WXG1 361 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 STAMQ92783 540 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 CCDC51Q96ER9 411 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 MTRQ99707 1265 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 TM6SF1Q9BZW5 370 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 GVINP1Q7Z2Y8 2422 aa23.76■■□□□ 1.39
SSH3-211ENST00000534112 F8W810 466 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 EPB41L2O43491 1005 aaKnown RBP23.75■■□□□ 1.39
SSH3-211ENST00000534112 RFPL2O75678 378 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 SCNN1GP51170 649 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 FOXK2Q01167 660 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 DSG1Q02413 1049 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 CYP4A11Q02928 519 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 NCBP1Q09161 790 aaKnown RBP23.75■■□□□ 1.39
SSH3-211ENST00000534112 MXD4Q14582 209 aaPredicted RBP23.75■■□□□ 1.39
SSH3-211ENST00000534112 ANGPT1Q15389 498 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 PIK3AP1Q6ZUJ8 805 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 OXER1Q8TDS5 423 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 CPB2Q96IY4 423 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 ZFP42Q96MM3 310 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 NAP1L4Q99733 375 aaKnown RBP23.75■■□□□ 1.39
SSH3-211ENST00000534112 CSRNP2Q9H175 543 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 XPNPEP1Q9NQW7 623 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 EPS15L1Q9UBC2 864 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 WNT16Q9UBV4 365 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 DENND4AQ7Z401 1863 aa23.75■■□□□ 1.39
SSH3-211ENST00000534112 NR1I2O75469 434 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 SPATA31D3P0C874 917 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 SPIRE1Q08AE8 756 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 SPATA31D4Q6ZUB0 917 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 POTEDQ86YR6 584 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 TPH2Q8IWU9 490 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 ADSSL1Q8N142 457 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 SMG7Q92540 1137 aaKnown RBP23.74■■□□□ 1.39
SSH3-211ENST00000534112 ZNF707Q96C28 371 aaPredicted RBP23.74■■□□□ 1.39
SSH3-211ENST00000534112 COLEC11Q9BWP8 271 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 CHST7Q9NS84 486 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 GJB4Q9NTQ9 266 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 PDRG1Q9NUG6 133 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 GIT1Q9Y2X7 761 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 CLUHO75153 1309 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 WDR87Q6ZQQ6 2873 aa23.74■■□□□ 1.39
SSH3-211ENST00000534112 INO80B-WBP1J3KQ70 363 aa23.73■■□□□ 1.39
SSH3-211ENST00000534112 CDKL5O76039 1030 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms