RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 BICD2Q8TD16 824 aa10.36□□□□□ -0.75
PACS1-214ENST00000533811 SLC5A5Q92911 643 aa10.36□□□□□ -0.75
PACS1-214ENST00000533811 SHDQ96IW2 340 aa10.36□□□□□ -0.75
PACS1-214ENST00000533811 RIT2Q99578 217 aa10.36□□□□□ -0.75
PACS1-214ENST00000533811 JPH2Q9BR39 696 aaPredicted RBP10.36□□□□□ -0.75
PACS1-214ENST00000533811 NIFKQ9BYG3 293 aaKnown RBP10.36□□□□□ -0.75
PACS1-214ENST00000533811 NT5C3AQ9H0P0 336 aa10.36□□□□□ -0.75
PACS1-214ENST00000533811 USP18Q9UMW8 372 aa10.36□□□□□ -0.75
PACS1-214ENST00000533811 COL4A3BPQ9Y5P4 624 aa10.36□□□□□ -0.75
PACS1-214ENST00000533811 CCDC196A0A1B0GTZ2 297 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 TGM5O43548 720 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 NR1I2O75469 434 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 PSMD10O75832 226 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 RPL17P18621 184 aaKnown RBP10.35□□□□□ -0.75
PACS1-214ENST00000533811 FSHRP23945 695 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 MLH1P40692 756 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 SCNN1GP51170 649 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 NPEPPSP55786 919 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 GPC5P78333 572 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 EXOSC10Q01780 885 aaKnown RBP10.35□□□□□ -0.75
PACS1-214ENST00000533811 DSG1Q02413 1049 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 KIAA0319Q5VV43 1072 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 MRPL10Q7Z7H8 261 aaKnown RBP10.35□□□□□ -0.75
PACS1-214ENST00000533811 COLGALT2Q8IYK4 626 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 CCDC148Q8NFR7 591 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 RDM1Q8NG50 284 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 ATRIPQ8WXE1 791 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 SECISBP2LQ93073 1101 aaKnown RBP10.35□□□□□ -0.75
PACS1-214ENST00000533811 TMEM143Q96AN5 459 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 CEP89Q96ST8 783 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 GAD1Q99259 594 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 RPP25Q9BUL9 199 aaKnown RBP10.35□□□□□ -0.75
PACS1-214ENST00000533811 BCO2Q9BYV7 579 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 RHOBTB2Q9BYZ6 727 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 PRKD2Q9BZL6 878 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 PLEKHA4Q9H4M7 779 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 MINDY3Q9H8M7 445 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 IFT122Q9HBG6 1241 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 RXFP1Q9HBX9 757 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 SLC2A4RGQ9NR83 387 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.35□□□□□ -0.75
PACS1-214ENST00000533811 VPS54Q9P1Q0 977 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 CDV3Q9UKY7 258 aaKnown RBP10.35□□□□□ -0.75
PACS1-214ENST00000533811 POLIQ9UNA4 740 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 EPG5Q9HCE0 2579 aa10.35□□□□□ -0.75
PACS1-214ENST00000533811 ACACBO00763 2458 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 KANSL1LA0AUZ9 987 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 DCDC2BA2VCK2 349 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 ANHXE9PGG2 379 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 SPTLC1O15269 473 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 ERLIN2O94905 339 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 STBD1O95210 358 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 NCLP19338 710 aaKnown RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 CD72P21854 359 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 ATXN1P54253 815 aaKnown RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 STARD6P59095 220 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 NTHL1P78549 312 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 MLF2Q15773 248 aaPredicted RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 ADCK5Q3MIX3 580 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 UBXN11Q5T124 520 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 FUT10Q6P4F1 479 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 PARM1Q6UWI2 310 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 SRGAP1Q7Z6B7 1085 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 GRASPQ7Z6J2 395 aaPredicted RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 MAML2Q8IZL2 1156 aaPredicted RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 TBCKQ8TEA7 893 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 PSPC1Q8WXF1 523 aaKnown RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 SLC7A3Q8WY07 619 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 RABGGTAQ92696 567 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 FGF14Q92915 247 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 CPB2Q96IY4 423 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 ZFP42Q96MM3 310 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 COLEC11Q9BWP8 271 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 SLC26A6Q9BXS9 759 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 EIF2AQ9BY44 585 aaKnown RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 SLKQ9H2G2 1235 aaPredicted RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 RNF39Q9H2S5 420 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 ZDHHC7Q9NXF8 308 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 SMG5Q9UPR3 1016 aaKnown RBP10.34□□□□□ -0.75
PACS1-214ENST00000533811 HES2Q9Y543 173 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 IPPQ9Y573 584 aa10.34□□□□□ -0.75
PACS1-214ENST00000533811 ARID2Q68CP9 1835 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 ARL5CA6NH57 179 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 FAM170BA6NMN3 283 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 PRPF3O43395 683 aaKnown RBP10.33□□□□□ -0.76
PACS1-214ENST00000533811 EDIL3O43854 480 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 TDP2O95551 362 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 CPA1P15085 419 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 SDHBP21912 280 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 HOXA11P31270 313 aaPredicted RBP10.33□□□□□ -0.76
PACS1-214ENST00000533811 USP11P51784 963 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 NLRP5P59047 1200 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 PSMC5P62195 406 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 USP41Q3LFD5 358 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 PRSS55Q6UWB4 352 aaPredicted RBP10.33□□□□□ -0.76
PACS1-214ENST00000533811 ANO5Q75V66 913 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 RASEFQ8IZ41 740 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 RNF149Q8NC42 400 aa10.33□□□□□ -0.76
PACS1-214ENST00000533811 SMG8Q8ND04 991 aaKnown RBP10.33□□□□□ -0.76
PACS1-214ENST00000533811 CNNM3Q8NE01 707 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms