RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 PDLIM2Q96JY6 352 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 CEP63Q96MT8 703 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 DHX33Q9H6R0 707 aaKnown RBP12□□□□□ -0.49
CCDC90B-218ENST00000533761 NOD1Q9Y239 953 aa12□□□□□ -0.49
CCDC90B-218ENST00000533761 CCDC169A6NNP5 214 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 DCDC2CA8MYV0 355 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 KCNJ18B7U540 433 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 MAFO75444 373 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 HOXC8P31273 242 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 ZNF75DP51815 510 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 IGBP1P78318 339 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 KCNJ12Q14500 433 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 SNX17Q15036 470 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 TARBP2Q15633 366 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 PTGISQ16647 500 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 MAEAQ7L5Y9 396 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 EPM2AIP1Q7L775 607 aaPredicted RBP11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 ANKRD33Q7Z3H0 272 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 HPS3Q969F9 1004 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 TOX2Q96NM4 488 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 ACCSQ96QU6 501 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 NTPCRQ9BSD7 190 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 SRRTQ9BXP5 876 aaKnown RBP11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 SLC6A16Q9GZN6 736 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 GBP3Q9H0R5 595 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 KMT5AQ9NQR1 393 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 TRAF3IP3Q9Y228 551 aa11.99□□□□□ -0.49
CCDC90B-218ENST00000533761 MYH11P35749 1972 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 TMEM150BA6NC51 233 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 SFI1A8K8P3 1242 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 ZBTB42B2RXF5 422 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 TLR3O15455 904 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 NRDCO43847 1150 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 RPLP2P05387 115 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 KLRC1P26715 233 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 NAMPTP43490 491 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 NCKAP1LP55160 1127 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 PEX3P56589 373 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 ADAM17P78536 824 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 STRN3Q13033 797 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 MAPK7Q13164 816 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 TFDP1Q14186 410 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 MYBPC2Q14324 1141 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 TCP11X2Q5H9J9 407 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 IER5Q5VY09 327 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 ANKRD40Q6AI12 368 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 GDF6Q6KF10 455 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 TAF2Q6P1X5 1199 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 PPP1R13LQ8WUF5 828 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 PSPC1Q8WXF1 523 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 SH2D3AQ9BRG2 576 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 POLR3FQ9H1D9 316 aaPredicted RBP11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 SAMSN1Q9NSI8 373 aaKnown RBP11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 IFNKQ9P0W0 207 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 IMPACTQ9P2X3 320 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 ARID2Q68CP9 1835 aa11.98□□□□□ -0.49
CCDC90B-218ENST00000533761 MBLAC1A4D2B0 266 aaPredicted RBP11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 TRIM49BA6NDI0 452 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 ASAP2O43150 1006 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 PQBP1O60828 265 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 TPM1P09493 284 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 MYBP10242 640 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 NR2F2P24468 414 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 EFNA5P52803 228 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 CDC42EP1Q00587 391 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 PPP2R3AQ06190 1150 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 NFIL3Q16649 462 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 HS1BP3Q53T59 392 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 MARCH8Q5T0T0 291 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 MTHFD1LQ6UB35 978 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 HAUS6Q7Z4H7 955 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 CREBRFQ8IUR6 639 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 NELFCDQ8IXH7 590 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 FAM126BQ8IXS8 530 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 DAW1Q8N136 415 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 METTL13Q8N6R0 699 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 DEPTORQ8TB45 409 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 TRAPPC12Q8WVT3 735 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 HTATIP2Q9BUP3 242 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 C2orf40Q9H1Z8 148 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 SEMA6BQ9H3T3 888 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 PDLIM7Q9NR12 457 aa11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 TRMT13Q9NUP7 481 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 LIMA1Q9UHB6 759 aaKnown RBP11.97□□□□□ -0.49
CCDC90B-218ENST00000533761 LRRC10BA6NIK2 292 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 N4BP3O15049 544 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 SLC16A3O15427 465 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 TREHO43280 583 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 B4GALT4O60513 344 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 C22orf31O95567 290 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 EPB41P11171 864 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 ATP1A3P13637 1013 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 SNRPBP14678 240 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 MTIF2P46199 727 aaKnown RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 NPTX2P47972 431 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 GSDMDP57764 484 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 ZNF200P98182 395 aaPredicted RBP11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 GTF2BQ00403 316 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 TLE2Q04725 743 aa11.96□□□□□ -0.49
CCDC90B-218ENST00000533761 ADAM9Q13443 819 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms