RNA–Protein interactions for RNA: ENST00000533727.5

AMBRA1-211, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene AMBRA1, Length 4,817 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-211ENST00000533727 C3orf67Q6ZVT6 689 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 MYBL1P10243 752 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 HNRNPH2P55795 449 aaKnown RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 ACTR2P61160 394 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 MAPRE1Q15691 268 aaKnown RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 SGO2Q562F6 1265 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 EFHBQ8N7U6 833 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 AKT1S1Q96B36 256 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 TMEM169Q96HH4 297 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 SLC4A9Q96Q91 983 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 CAMKK2Q96RR4 588 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 ADAM22Q9P0K1 906 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 KLHL14Q9P2G3 628 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 MAD2L2Q9UI95 211 aa12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 TPX2Q9ULW0 747 aaKnown RBP12.04□□□□□ -0.48
AMBRA1-211ENST00000533727 CTNNA1P35221 906 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 APBA1Q02410 837 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 TERF2Q15554 542 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 CTAGE3PQ8IX95 158 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 NKX2-3Q8TAU0 364 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 SH3TC2Q8TF17 1288 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 FBXO28Q9NVF7 368 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 SLC15A5A6NIM6 579 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 H7C4K7 107 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 SMIM24O75264 130 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 SDC4P31431 198 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 GCLMP48507 274 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 TROAPQ12815 778 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 PKP1Q13835 747 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 ATF7IP2Q5U623 682 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 APOBEC3HQ6NTF7 200 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 C4orf50Q6ZRC1 276 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 ARHGEF18Q6ZSZ5 1173 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 FAM133AQ8N9E0 248 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 PRPF31Q8WWY3 499 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 EDEM3Q9BZQ6 932 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 ASCC2Q9H1I8 757 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 FRMD3A2A2Y4 597 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 I3L4J1 428 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 EIF3DO15371 548 aaKnown RBP eCLIP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 RGS16O15492 202 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 KPNA2P52292 529 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 BTBD8Q5XKL5 378 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 DENND2CQ68D51 928 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 METTL7BQ6UX53 244 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 TTC13Q8NBP0 860 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 AFG1LQ8WV93 481 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 SUDS3Q9H7L9 328 aaPredicted RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 UBN1Q9NPG3 1134 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 ADAMTSL3P82987 1691 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 KRT15P19012 456 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 SREBF1P36956 1147 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 THPOP40225 353 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 STKLD1Q8NE28 680 aa12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 RBM41Q96IZ5 413 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 DIS3Q9Y2L1 958 aaKnown RBP12.03□□□□□ -0.48
AMBRA1-211ENST00000533727 PSMA2P25787 234 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 ANTXR2P58335 489 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 SP3Q02447 781 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 ELAVL2Q12926 359 aaKnown RBP12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 ARHGAP15Q53QZ3 475 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 IQSEC1Q6DN90 963 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 TAF2Q6P1X5 1199 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 NIPA1Q7RTP0 329 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 PBKQ96KB5 322 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 WDR18Q9BV38 432 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 RGL1Q9NZL6 768 aa12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 SCAF8Q9UPN6 1271 aaKnown RBP12.02□□□□□ -0.48
AMBRA1-211ENST00000533727 PFDN1O60925 122 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 TRPA1O75762 1119 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 SHMT1P34896 483 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 RAB27AP51159 221 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 TMEM270Q6UE05 265 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 GPIHBP1Q8IV16 184 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 TMEM143Q96AN5 459 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 NGRNQ9NPE2 291 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 RPSAP08865 295 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 ALDH7A1P49419 539 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 ERVK-9P63128 1117 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 ERVK-24P63145 666 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 C7orf25Q9BPX7 421 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 DESI2Q9BSY9 194 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 CALN1Q9BXU9 219 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 TUBE1Q9UJT0 475 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 LGALS16A8MUM7 142 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 M0QYV0 167 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 PTPRAP18433 802 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 STX2P32856 288 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 CYP27A1Q02318 531 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 KCNH2Q12809 1159 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 SGSM1Q2NKQ1 1148 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 KAZNQ674X7 775 aa12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 UBQLN1Q9UMX0 589 aaKnown RBP12.02□□□□□ -0.49
AMBRA1-211ENST00000533727 MIF4GDA9UHW6 222 aaKnown RBP12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 MYO1CO00159 1063 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 VWA5AO00534 786 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 BUB1O43683 1085 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 CYP11B2P19099 503 aa12.01□□□□□ -0.49
AMBRA1-211ENST00000533727 GUCY2FP51841 1108 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms