RNA–Protein interactions for RNA: ENST00000533464.5

PHRF1-205, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-205ENST00000533464 FBXL5Q9UKA1 691 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 GNAT1P11488 350 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 HP1BP3Q5SSJ5 553 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-205ENST00000533464 ZNF449Q6P9G9 518 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 FAM47EQ6ZV65 393 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 CATSPER3Q86XQ3 398 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 ACTR5Q9H9F9 607 aaPredicted RBP18.7■□□□□ 0.58
PHRF1-205ENST00000533464 TXLNGQ9NUQ3 528 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 POLLQ9UGP5 575 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 ABT1Q9ULW3 272 aaKnown RBP18.7■□□□□ 0.58
PHRF1-205ENST00000533464 GPS1Q13098 491 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 JADE1Q6IE81 842 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 TTC17Q96AE7 1141 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 MLXIPLQ9NP71 852 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 INPP5FQ9Y2H2 1132 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 PITPNM2Q9BZ72 1349 aa18.7■□□□□ 0.58
PHRF1-205ENST00000533464 MAP2P11137 1827 aaKnown RBP18.69■□□□□ 0.58
PHRF1-205ENST00000533464 GOLGA8CPA6NN73 597 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 SLC26A4O43511 780 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 NTRK3Q16288 839 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 SNRNP35Q16560 246 aaKnown RBP18.69■□□□□ 0.58
PHRF1-205ENST00000533464 SLC30A5Q8TAD4 765 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 SLC35G2Q8TBE7 412 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 TRIM56Q9BRZ2 755 aaKnown RBP18.69■□□□□ 0.58
PHRF1-205ENST00000533464 AGXT2Q9BYV1 514 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 GGPS1O95749 300 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 TXNP10599 105 aaKnown RBP18.69■□□□□ 0.58
PHRF1-205ENST00000533464 ANXA13P27216 316 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 NFIAQ12857 509 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 FAM102AQ5T9C2 384 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-205ENST00000533464 PLA2G4FQ68DD2 849 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 AGBL1Q96MI9 1066 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 KLHL8Q9P2G9 620 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-205ENST00000533464 AP3M2P53677 418 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 ARHGEF6Q15052 776 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 PRAMEF18Q5VWM3 479 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 RAB44Q7Z6P3 723 aaPredicted RBP18.69■□□□□ 0.58
PHRF1-205ENST00000533464 MAML1Q92585 1016 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 NUDCD1Q96RS6 583 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 RIT2Q99578 217 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 MXRA8Q9BRK3 442 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 SPATA31D1Q6ZQQ2 1576 aa18.69■□□□□ 0.58
PHRF1-205ENST00000533464 MYCP01106 439 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-205ENST00000533464 WDR72Q3MJ13 1102 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 MYLK4Q86YV6 388 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-205ENST00000533464 GBP5Q96PP8 586 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 FIS1Q9Y3D6 152 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 ITSN1Q15811 1721 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 KRT14P02533 472 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 CD44P16070 742 aaKnown RBP18.68■□□□□ 0.58
PHRF1-205ENST00000533464 PPP2R2AP63151 447 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 PARVAQ9NVD7 372 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 COPEO14579 308 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 RYBPQ8N488 228 aaPredicted RBP18.68■□□□□ 0.58
PHRF1-205ENST00000533464 G3BP2Q9UN86 482 aaKnown RBP18.68■□□□□ 0.58
PHRF1-205ENST00000533464 PRKCBP05771 671 aa18.68■□□□□ 0.58
PHRF1-205ENST00000533464 DHX34Q14147 1143 aaKnown RBP18.68■□□□□ 0.58
PHRF1-205ENST00000533464 VGLL3A8MV65 326 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 RBM43Q6ZSC3 357 aaKnown RBP18.67■□□□□ 0.58
PHRF1-205ENST00000533464 EPM2AIP1Q7L775 607 aaPredicted RBP18.67■□□□□ 0.58
PHRF1-205ENST00000533464 ATP6V1E2Q96A05 226 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 ATP6V1G3Q96LB4 118 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 TTC25Q96NG3 672 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 C19orf81C9J6K1 198 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 OPHN1O60890 802 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 BCAR1P56945 870 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 NAB2Q15742 525 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 RBM46Q8TBY0 533 aaKnown RBP18.67■□□□□ 0.58
PHRF1-205ENST00000533464 ERGIC2Q96RQ1 377 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 ELP3Q9H9T3 547 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 KCNH7Q9NS40 1196 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 BRAFP15056 766 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 STX1BP61266 288 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 MAPK13O15264 365 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 RPSAP08865 295 aaKnown RBP18.67■□□□□ 0.58
PHRF1-205ENST00000533464 KPNA2P52292 529 aaKnown RBP18.67■□□□□ 0.58
PHRF1-205ENST00000533464 ATG16L1Q676U5 607 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 TBC1D1Q86TI0 1168 aaPredicted RBP18.67■□□□□ 0.58
PHRF1-205ENST00000533464 KIF12Q96FN5 646 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 GCOM2Q9BZD3 368 aaPredicted RBP18.67■□□□□ 0.58
PHRF1-205ENST00000533464 A0A1W2PQJ5 194 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 ASB14A6NK59 587 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 A8MXQ7 604 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 KRT38O76015 456 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 GYS1P13807 737 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 TMPRSS15P98073 1019 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 GRB10Q13322 594 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 MIPOL1Q8TD10 442 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 FBXO28Q9NVF7 368 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 SMARCAL1Q9NZC9 954 aa18.67■□□□□ 0.58
PHRF1-205ENST00000533464 A0A0G2JND7 137 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 KIAA0391O15091 583 aaKnown RBP18.66■□□□□ 0.58
PHRF1-205ENST00000533464 ESRRAP11474 423 aaPredicted RBP18.66■□□□□ 0.58
PHRF1-205ENST00000533464 BEND6Q5SZJ8 279 aaPredicted RBP18.66■□□□□ 0.58
PHRF1-205ENST00000533464 STYK1Q6J9G0 422 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 FUCA2Q9BTY2 467 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 CYP26B1Q9NR63 512 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 SUCLA2Q9P2R7 463 aaPredicted RBP18.66■□□□□ 0.58
PHRF1-205ENST00000533464 GMNCA6NCL1 334 aa18.66■□□□□ 0.58
PHRF1-205ENST00000533464 ANGEL2Q5VTE6 544 aaKnown RBP18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms