RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 HEY1Q9Y5J3 304 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 ADGRB2O60241 1585 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 REREQ9P2R6 1566 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 CCDC189A1A4V9 331 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 BAG2O95816 211 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 PSMC5P62195 406 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 PSMC6P62333 389 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 MAPK6Q16659 721 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 ARHGAP22Q7Z5H3 698 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 TBC1D1Q86TI0 1168 aaPredicted RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 SLC35G2Q8TBE7 412 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 PACSIN1Q9BY11 444 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 PLAGL2Q9UPG8 496 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 PCDHA10Q9Y5I2 948 aa13.06□□□□□ -0.32
BDNF-218ENST00000533246 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.06□□□□□ -0.32
BDNF-218ENST00000533246 A6NJR5 290 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 PSMA2P25787 234 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 FMO5P49326 533 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 CUL1Q13616 776 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 TFDP1Q14186 410 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 LRRC31Q6UY01 552 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 FRMD5Q7Z6J6 570 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 SPATS2Q86XZ4 545 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 MAP7D3Q8IWC1 876 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 CPA5Q8WXQ8 436 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 TAF1DQ9H5J8 278 aaPredicted RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 ZNF711Q9Y462 761 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 ITIH6Q6UXX5 1313 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 TLR3O15455 904 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 CSPG5O95196 566 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 MMEP08473 750 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 H2AFXP16104 143 aaPredicted RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 RPA1P27694 616 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 KRT76Q01546 638 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 ITKQ08881 620 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 SCYL3Q8IZE3 742 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 TMCO5AQ8N6Q1 288 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 RFFLQ8WZ73 363 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 ATP6V0A4Q9HBG4 840 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 GINM1Q9NU53 330 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 FNDC3AQ9Y2H6 1198 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 PABPN1LA6NDY0 278 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 MSH4O15457 936 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 CIB2O75838 187 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 MRPS9P82933 396 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 IL9RQ01113 521 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 SLC10A5Q5PT55 438 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 C16orf87Q6PH81 154 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 CCDC137Q6PK04 289 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 HHIPL2Q6UWX4 724 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 PARP9Q8IXQ6 854 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 FBXL13Q8NEE6 735 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 POLR3FQ9H1D9 316 aaPredicted RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 VCX3BQ9H321 246 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 RPF1Q9H9Y2 349 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 VCX3AQ9NNX9 186 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 SPATA31D1Q6ZQQ2 1576 aa13.05□□□□□ -0.32
BDNF-218ENST00000533246 PDS5AQ29RF7 1337 aaKnown RBP13.05□□□□□ -0.32
BDNF-218ENST00000533246 PSMD14O00487 310 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 FGFR4P22455 802 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 KCNA4P22459 653 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 PAPOLAP51003 745 aaKnown RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 SEZ6Q53EL9 994 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 ZNF667Q5HYK9 610 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 NANOGNBQ7Z5D8 188 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 CCDC125Q86Z20 511 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 GLIS3Q8NEA6 775 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 OR6B3Q8NGW1 331 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 ATP2A3Q93084 1043 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 RUSC1Q9BVN2 902 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 ZNF70Q9UC06 446 aaPredicted RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 PNMA2Q9UL42 364 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.04□□□□□ -0.32
BDNF-218ENST00000533246 JAK3P52333 1124 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 ZNF568Q3ZCX4 644 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 GLE1Q53GS7 698 aaKnown RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 NXNQ6DKJ4 435 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 PYROXD1Q8WU10 500 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 RBAKQ9NYW8 714 aaPredicted RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 HSPBP1Q9NZL4 362 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 SEL1LQ9UBV2 794 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 HMGB1P1B2RPK0 211 aaPredicted RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 MCF2LO15068 1137 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 GNAT1P11488 350 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 HSPA6P17066 643 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 ORC2Q13416 577 aaPredicted RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 SLMAPQ14BN4 828 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 TAF11Q15544 211 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 BEND6Q5SZJ8 279 aaPredicted RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 ZFPM1Q8IX07 1006 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 DNAAF3Q8N9W5 541 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 AGPAT1Q99943 283 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 DDX4Q9NQI0 724 aaKnown RBP13.04□□□□□ -0.32
BDNF-218ENST00000533246 MYOM1P52179 1685 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 SSU72P8A0A1W2PR75 194 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 MSH2P43246 934 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 SEC24CP53992 1094 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 SLC12A2P55011 1212 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 CDKAL1Q5VV42 579 aa13.04□□□□□ -0.32
BDNF-218ENST00000533246 OLFML1Q6UWY5 402 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms