RNA–Protein interactions for RNA: ENST00000533189.1

CTNND1-235, Transcript of catenin delta 1, humanhuman

TSL 3

Gene CTNND1, Length 498 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-235ENST00000533189 USP11P51784 963 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 STARD6P59095 220 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 EXOSC10Q01780 885 aaKnown RBP11.96□□□□□ -0.49
CTNND1-235ENST00000533189 HTR4Q13639 388 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 ZNF528Q3MIS6 628 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 VARS2Q5ST30 1063 aaKnown RBP11.96□□□□□ -0.49
CTNND1-235ENST00000533189 KIAA0319Q5VV43 1072 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 POTEGQ6S5H5 508 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 SRGAP1Q7Z6B7 1085 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 PALB2Q86YC2 1186 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 CNNM3Q8NE01 707 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 CCDC148Q8NFR7 591 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 SECISBP2LQ93073 1101 aaKnown RBP11.96□□□□□ -0.49
CTNND1-235ENST00000533189 GJA10Q969M2 543 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 CEP89Q96ST8 783 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 BCO2Q9BYV7 579 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 PRKD2Q9BZL6 878 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 SPATA6Q9NWH7 488 aaPredicted RBP11.96□□□□□ -0.49
CTNND1-235ENST00000533189 MARCH5Q9NX47 278 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 ZDHHC7Q9NXF8 308 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 COL4A3BPQ9Y5P4 624 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 NUMBLQ9Y6R0 609 aa11.96□□□□□ -0.49
CTNND1-235ENST00000533189 CHD8Q9HCK8 2581 aa11.96□□□□□ -0.5
CTNND1-235ENST00000533189 MAP1BP46821 2468 aaKnown RBP11.95□□□□□ -0.5
CTNND1-235ENST00000533189 TGM5O43548 720 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 PSMD10O75832 226 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 STBD1O95210 358 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 C1RP00736 705 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 GLULP15104 373 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 NCLP19338 710 aaKnown RBP11.95□□□□□ -0.5
CTNND1-235ENST00000533189 FSHRP23945 695 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 DSG1Q02413 1049 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 GLYCTKQ8IVS8 523 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 COLGALT2Q8IYK4 626 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 ATRIPQ8WXE1 791 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 SLC7A3Q8WY07 619 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 COLEC11Q9BWP8 271 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 IFT122Q9HBG6 1241 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.95□□□□□ -0.5
CTNND1-235ENST00000533189 FBXO4Q9UKT5 387 aa11.95□□□□□ -0.5
CTNND1-235ENST00000533189 ZFP37Q9Y6Q3 630 aaPredicted RBP11.95□□□□□ -0.5
CTNND1-235ENST00000533189 KANSL1LA0AUZ9 987 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 PRPF3O43395 683 aaKnown RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 LRRN2O75325 713 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 PAPLNO95428 1278 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 SRGAP2CP0DJJ0 459 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 PSMC5P62195 406 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 CREMQ03060 361 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 CSTF1Q05048 431 aaKnown RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 SNW1Q13573 536 aaKnown RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 UBXN2BQ14CS0 331 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 USP41Q3LFD5 358 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 UBXN11Q5T124 520 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 PLA2G4FQ68DD2 849 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 EXOC8Q8IYI6 725 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 RNF168Q8IYW5 571 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 MAML2Q8IZL2 1156 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 ST13P5Q8NFI4 369 aaPredicted RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 PSPC1Q8WXF1 523 aaKnown RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 CDV3Q9UKY7 258 aaKnown RBP11.94□□□□□ -0.5
CTNND1-235ENST00000533189 PCDHGA2Q9Y5H1 932 aa11.94□□□□□ -0.5
CTNND1-235ENST00000533189 ARL5CA6NH57 179 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 PRR5-ARHGAP8B1AHC4 643 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 DKC1O60832 514 aaKnown RBP eCLIP11.93□□□□□ -0.5
CTNND1-235ENST00000533189 ZMYND10O75800 440 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 ERLIN2O94905 339 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 HOXA11P31270 313 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-235ENST00000533189 MLH1P40692 756 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 MAGEA9P43362 315 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 SCNN1GP51170 649 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 ATXN1P54253 815 aaKnown RBP11.93□□□□□ -0.5
CTNND1-235ENST00000533189 GPC5P78333 572 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 ARHGAP8P85298 464 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 LMNB2Q03252 620 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 PRKCQQ04759 706 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 NCBP1Q09161 790 aaKnown RBP11.93□□□□□ -0.5
CTNND1-235ENST00000533189 KRT32Q14532 448 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 MLF2Q15773 248 aaPredicted RBP11.93□□□□□ -0.5
CTNND1-235ENST00000533189 Q4G0T1 1027 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 FUT10Q6P4F1 479 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 ANO5Q75V66 913 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 MTSS1LQ765P7 747 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 GPR65Q8IYL9 337 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 TBCKQ8TEA7 893 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 PRPF31Q8WWY3 499 aaKnown RBP11.93□□□□□ -0.5
CTNND1-235ENST00000533189 B3GALT6Q96L58 329 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 GAD1Q99259 594 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 C22orf23Q9BZE7 217 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 MINDY3Q9H8M7 445 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 CHST7Q9NS84 486 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 VPS54Q9P1Q0 977 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 FNIP2Q9P278 1114 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 CDH7Q9ULB5 785 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 IPPQ9Y573 584 aa11.93□□□□□ -0.5
CTNND1-235ENST00000533189 FAM170BA6NMN3 283 aa11.92□□□□□ -0.5
CTNND1-235ENST00000533189 ASAP2O43150 1006 aa11.92□□□□□ -0.5
CTNND1-235ENST00000533189 EDIL3O43854 480 aa11.92□□□□□ -0.5
CTNND1-235ENST00000533189 EFEMP2O95967 443 aa11.92□□□□□ -0.5
CTNND1-235ENST00000533189 HMGB1P09429 215 aaKnown RBP11.92□□□□□ -0.5
CTNND1-235ENST00000533189 NPEPPSP55786 919 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms