RNA–Protein interactions for RNA: ENST00000533162.1

PUF60-221, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 3

Gene PUF60, Length 761 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-221ENST00000533162 LINC00271P0C7V0 271 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 PLCB3Q01970 1234 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 GRIN1Q05586 938 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 RAD51AP2Q09MP3 1159 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 SPECC1Q5M775 1068 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 SV2BQ7L1I2 683 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 SPPL3Q8TCT6 385 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 MICAL1Q8TDZ2 1067 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 POF1BQ8WVV4 589 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 HLA-CQ95604 372 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 CLIC6Q96NY7 704 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 EIF2AQ9BY44 585 aaKnown RBP16.39■□□□□ 0.21
PUF60-221ENST00000533162 MRPL4Q9BYD3 311 aaKnown RBP16.39■□□□□ 0.21
PUF60-221ENST00000533162 POLD4Q9HCU8 107 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 ALG13Q9NP73 1137 aaKnown RBP16.39■□□□□ 0.21
PUF60-221ENST00000533162 RNF19AQ9NV58 838 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 THEGQ9P2T0 379 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 ARID2Q68CP9 1835 aa16.39■□□□□ 0.21
PUF60-221ENST00000533162 GRM6O15303 877 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 B4GALT5O43286 388 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 CUTAO60888 179 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 ZC3H11AO75152 810 aaKnown RBP eCLIP16.38■□□□□ 0.21
PUF60-221ENST00000533162 ALDH2P05091 517 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 ITGB1P05556 798 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 STAT6P42226 847 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 MRPS5P82675 430 aaKnown RBP16.38■□□□□ 0.21
PUF60-221ENST00000533162 MCM6Q14566 821 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 ATF7IP2Q5U623 682 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 AGMOQ6ZNB7 445 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 LRRC55Q6ZSA7 311 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 MYCT1Q8N699 235 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 RPS6KC1Q96S38 1066 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 PYM1Q9BRP8 204 aaKnown RBP16.38■□□□□ 0.21
PUF60-221ENST00000533162 KIFC3Q9BVG8 833 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 CCDC113Q9H0I3 377 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 ZHX3Q9H4I2 956 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 PARVGQ9HBI0 331 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 PARP2Q9UGN5 583 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 ZMYM2Q9UBW7 1377 aa16.38■□□□□ 0.21
PUF60-221ENST00000533162 CDH23Q9H251 3354 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 SFI1A8K8P3 1242 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 SLC16A4O15374 487 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 ME1P48163 572 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 BCAR1P56945 870 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 AMPD3Q01432 767 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 FOXD4L6Q3SYB3 417 aaPredicted RBP16.37■□□□□ 0.21
PUF60-221ENST00000533162 FOXD4L3Q6VB84 417 aaPredicted RBP16.37■□□□□ 0.21
PUF60-221ENST00000533162 TMEM87AQ8NBN3 555 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 SMG8Q8ND04 991 aaKnown RBP16.37■□□□□ 0.21
PUF60-221ENST00000533162 MRPS27Q92552 414 aaKnown RBP16.37■□□□□ 0.21
PUF60-221ENST00000533162 TMEM169Q96HH4 297 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 TMEM175Q9BSA9 504 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 TCHPQ9BT92 498 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 APOL6Q9BWW8 343 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 GBP3Q9H0R5 595 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 PDZD7Q9H5P4 517 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 NGRNQ9NPE2 291 aaKnown RBP16.37■□□□□ 0.21
PUF60-221ENST00000533162 TLR9Q9NR96 1032 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 BLOC1S4Q9NUP1 217 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 TBC1D13Q9NVG8 400 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 FAM13BQ9NYF5 915 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 ARHGAP28Q9P2N2 729 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 TNFSF13BQ9Y275 285 aa16.37■□□□□ 0.21
PUF60-221ENST00000533162 ARL5CA6NH57 179 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 YARSP54577 528 aaKnown RBP16.36■□□□□ 0.21
PUF60-221ENST00000533162 KRT85P78386 507 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 MAPK7Q13164 816 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 ARSHQ5FYA8 562 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 DAW1Q8N136 415 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 BICD1Q96G01 975 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 REEP2Q9BRK0 252 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 CUEDC2Q9H467 287 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 FAN1Q9Y2M0 1017 aa16.36■□□□□ 0.21
PUF60-221ENST00000533162 BRD1O95696 1058 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 POMCP01189 267 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 MLH1P40692 756 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 GIT2Q14161 759 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 TCEAL5Q5H9L2 206 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 USP49Q70CQ1 688 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 SLC39A11Q8N1S5 342 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 IQUBQ8NA54 791 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 GAD1Q99259 594 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 CDCA3Q99618 268 aaPredicted RBP16.35■□□□□ 0.21
PUF60-221ENST00000533162 ACO2Q99798 780 aaKnown RBP16.35■□□□□ 0.21
PUF60-221ENST00000533162 CCDC94Q9BW85 323 aaPredicted RBP16.35■□□□□ 0.21
PUF60-221ENST00000533162 NXF3Q9H4D5 531 aaKnown RBP16.35■□□□□ 0.21
PUF60-221ENST00000533162 NRDE2Q9H7Z3 1164 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 ENTPD7Q9NQZ7 604 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 TOPORSQ9NS56 1045 aaPredicted RBP16.35■□□□□ 0.21
PUF60-221ENST00000533162 CHD7Q9P2D1 2997 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 HES2Q9Y543 173 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 RALGAPA2Q2PPJ7 1873 aa16.35■□□□□ 0.21
PUF60-221ENST00000533162 NPHP3-ACAD11A0A0J9YXS1 232 aa16.34■□□□□ 0.21
PUF60-221ENST00000533162 MEIS3P2A8K0S8 358 aa16.34■□□□□ 0.21
PUF60-221ENST00000533162 INPPL1O15357 1258 aa16.34■□□□□ 0.21
PUF60-221ENST00000533162 TRAK2O60296 914 aa16.34■□□□□ 0.21
PUF60-221ENST00000533162 GALTP07902 379 aa16.34■□□□□ 0.21
PUF60-221ENST00000533162 SRGAP2BP0DMP2 458 aa16.34■□□□□ 0.21
PUF60-221ENST00000533162 AKAP5P24588 427 aa16.34■□□□□ 0.21
PUF60-221ENST00000533162 MATR3P43243 847 aaKnown RBP eCLIP16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms