RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 TRAF3IP3Q9Y228 551 aa20.21■□□□□ 0.83
SMPD1-208ENST00000533123 A0A1W2PQC6 194 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 CLIC2O15247 247 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 PTENP60484 403 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 SYCP1Q15431 976 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 MAN2A1Q16706 1144 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 EDRF1Q3B7T1 1238 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 TAF2Q6P1X5 1199 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 ZBTB8OSQ8IWT0 167 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 ZC3H3Q8IXZ2 948 aaKnown RBP20.2■□□□□ 0.82
SMPD1-208ENST00000533123 WNT8BQ93098 351 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 HVCN1Q96D96 273 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 C16orf45Q96MC5 204 aaPredicted RBP20.2■□□□□ 0.82
SMPD1-208ENST00000533123 CEP63Q96MT8 703 aa20.2■□□□□ 0.82
SMPD1-208ENST00000533123 A0A0U1RQG5 324 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-208ENST00000533123 RBAK-RBAKDNI3L0D1 243 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 INO80B-WBP1J3KQ70 363 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 NR2F2P24468 414 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 EFNA5P52803 228 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 STRN3Q13033 797 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 ADAM9Q13443 819 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 CCDC40Q4G0X9 1142 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 PPP4R3CPQ6ZMV5 832 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 SERINC5Q86VE9 423 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 PANX2Q96RD6 677 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 INO80BQ9C086 356 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-208ENST00000533123 MCOLN1Q9GZU1 580 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 NDST4Q9H3R1 872 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 TMEM134Q9H6X4 195 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 CDHR5Q9HBB8 845 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 DYNC1I1O14576 645 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 GPR32O75388 356 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 EDN1P05305 212 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 IQCF3P0C7M6 154 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 MNX1P50219 401 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-208ENST00000533123 HS2ST1Q7LGA3 356 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 SENP6Q9GZR1 1112 aaPredicted RBP20.19■□□□□ 0.82
SMPD1-208ENST00000533123 C2orf40Q9H1Z8 148 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 ADAMTS10Q9H324 1103 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 AGPAT3Q9NRZ7 376 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 EXOC7Q9UPT5 735 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 NOD1Q9Y239 953 aa20.19■□□□□ 0.82
SMPD1-208ENST00000533123 CALUO43852 315 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-208ENST00000533123 PHKA2P46019 1235 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 GJA8P48165 433 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 PTPN11Q06124 597 aaPredicted RBP20.18■□□□□ 0.82
SMPD1-208ENST00000533123 POU5F1BQ06416 359 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 CNGA4Q8IV77 575 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 SLC43A3Q8NBI5 491 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 KCNN1Q92952 543 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 BICD1Q96G01 975 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 CCDC113Q9H0I3 377 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 TRPV6Q9H1D0 765 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 PHLPP2Q6ZVD8 1323 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 TTC26A0AVF1 554 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 TTLL13PA6NNM8 815 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 ANKRD63C9JTQ0 380 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 ARVCFO00192 962 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 HNRNPDLO14979 420 aaKnown RBP20.18■□□□□ 0.82
SMPD1-208ENST00000533123 TPM1P09493 284 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 ABCD1P33897 745 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 TRIM14Q14142 442 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 MAPK6Q16659 721 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 CCDC155Q8N6L0 562 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 OSMRQ99650 979 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 NFKBIZQ9BYH8 718 aa20.18■□□□□ 0.82
SMPD1-208ENST00000533123 CETN3O15182 167 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 STX10O60499 249 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 B4GALT4O60513 344 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 NR3C1P04150 777 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 SCP2P22307 547 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 KCNJ6P48051 423 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 MBTD1Q05BQ5 628 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 FKBP15Q5T1M5 1219 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 ZNF410Q86VK4 478 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 NME8Q8N427 588 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 TARS2Q9BW92 718 aaKnown RBP20.17■□□□□ 0.82
SMPD1-208ENST00000533123 ABHD10Q9NUJ1 306 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 SOWAHDA6NJG2 315 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 ARHGAP6O43182 974 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 PRKCBP05771 671 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 CDC42EP1Q00587 391 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 MTF1Q14872 753 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 SLC39A4Q6P5W5 647 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 PCMTD1Q96MG8 357 aaPredicted RBP20.17■□□□□ 0.82
SMPD1-208ENST00000533123 ERGIC2Q96RQ1 377 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 FZD8Q9H461 694 aa20.17■□□□□ 0.82
SMPD1-208ENST00000533123 IFNLR1Q8IU57 520 aaPredicted RBP20.16■□□□□ 0.82
SMPD1-208ENST00000533123 DIS3LQ8TF46 1054 aaKnown RBP20.16■□□□□ 0.82
SMPD1-208ENST00000533123 PPP1R13BQ96KQ4 1090 aa20.16■□□□□ 0.82
SMPD1-208ENST00000533123 CBWD1Q9BRT8 395 aa20.16■□□□□ 0.82
SMPD1-208ENST00000533123 PCIF1Q9H4Z3 704 aa20.16■□□□□ 0.82
SMPD1-208ENST00000533123 KCND1Q9NSA2 647 aa20.16■□□□□ 0.82
SMPD1-208ENST00000533123 B4GALT5O43286 388 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 GNA14O95837 355 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 ADSSP30520 456 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 KRT9P35527 623 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 LIG4P49917 911 aa20.15■□□□□ 0.82
SMPD1-208ENST00000533123 ATN1P54259 1190 aaPredicted RBP20.15■□□□□ 0.82
SMPD1-208ENST00000533123 TOGARAM2Q6ZUX3 1019 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms