RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 LAPTM4AQ15012 233 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 WDR43Q15061 677 aaKnown RBP eCLIP2.04□□□□□ -2.08
KNL1-211ENST00000533001 IL17AQ16552 155 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 KSR1Q8IVT5 923 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 ADGRF2Q8IZF7 708 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 SYNPOQ8N3V7 929 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 PPP1R10Q96QC0 940 aaKnown RBP2.04□□□□□ -2.08
KNL1-211ENST00000533001 DUSP9Q99956 384 aaKnown RBP2.04□□□□□ -2.08
KNL1-211ENST00000533001 SH2D3AQ9BRG2 576 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 DUSP15Q9H1R2 295 aaPredicted RBP2.04□□□□□ -2.08
KNL1-211ENST00000533001 IKZF4Q9H2S9 585 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 CEP72Q9P209 647 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 CNPY2Q9Y2B0 182 aa2.04□□□□□ -2.08
KNL1-211ENST00000533001 DNAH1Q9P2D7 4330 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 LY6G6EA0A0G2JKS1 128 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 ZBTB5O15062 677 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 SGSM2O43147 1006 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 ALAS1P13196 640 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 FGFR3P22607 806 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 HOXA9P31269 272 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 HOXD13P35453 343 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 PHKA2P46019 1235 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 CDCA2Q69YH5 1023 aaPredicted RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 RNF207Q6ZRF8 634 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 GLRX5Q86SX6 157 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 ANKRD35Q8N283 1001 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 CEP120Q8N960 986 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 LMLNQ96KR4 655 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 ASB16Q96NS5 453 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 RPS6KC1Q96S38 1066 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 CELF4Q9BZC1 486 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 NT5C3AQ9H0P0 336 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 DYNC1LI1Q9Y6G9 523 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 U3KQA8 63 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 NT5C1B-RDH14C9J2C7 533 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 TMEM189-UBE2V1I3L0A0 370 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 TOP1P11387 765 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 LIFRP42702 1097 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 KIR2DL1P43626 348 aaPredicted RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 SHBQ15464 509 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 PUS10Q3MIT2 529 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 TIGD5Q53EQ6 642 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 SLC39A4Q6P5W5 647 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 MTHFD1LQ6UB35 978 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 SLC24A5Q71RS6 500 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 CYFIP1Q7L576 1253 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 NPAS4Q8IUM7 802 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 ETFBKMTQ8IXQ9 262 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 MYO19Q96H55 970 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 PRR11Q96HE9 360 aaPredicted RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 MTRQ99707 1265 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 POLR3CQ9BUI4 534 aaPredicted RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 EIF2AQ9BY44 585 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 CNNM2Q9H8M5 875 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 POLR3EQ9NVU0 708 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 MAP3K20Q9NYL2 800 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 DNMT3BQ9UBC3 853 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 A0A1W2PQF6 199 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 SPTLC1O15269 473 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 ADAM23O75077 832 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 AMHP03971 560 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 CD72P21854 359 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 SLC1A4P43007 532 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 SEMA3BQ13214 749 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 LRRTM3Q86VH5 581 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 WBP2Q969T9 261 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 KLHL5Q96PQ7 755 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 ZKSCAN3Q9BRR0 538 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 CAPN10Q9HC96 672 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 AGO4Q9HCK5 861 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 AGPAT5Q9NUQ2 364 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 METRNQ9UJH8 293 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 USP20Q9Y2K6 914 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 KMT2AQ03164 3969 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 HUWE1Q7Z6Z7 4374 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 ESYT2A0FGR8 921 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 WDR27A2RRH5 827 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 HOXB8P17481 243 aaPredicted RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 LAMC2Q13753 1193 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 GRIK4Q16099 956 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 LETM2Q2VYF4 491 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 STXBP5Q5T5C0 1151 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 VITQ6UXI7 678 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 UBALD2Q8IYN6 164 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 RPUSD2Q8IZ73 545 aaKnown RBP2.03□□□□□ -2.08
KNL1-211ENST00000533001 SAMD3Q8N6K7 520 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 OR6J1Q8NGC5 347 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 FGF13Q92913 245 aa2.03□□□□□ -2.08
KNL1-211ENST00000533001 A0A1B0GUA9 196 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TGM5O43548 720 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 CD59P13987 128 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 WEE1P30291 646 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 NMIQ13287 307 aaPredicted RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 WWC2Q6AWC2 1192 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 TCEAL6Q6IPX3 200 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 C1orf210Q8IVY1 113 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 ZC3H3Q8IXZ2 948 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 MIER1Q8N108 512 aa2.02□□□□□ -2.09
KNL1-211ENST00000533001 CMTR1Q8N1G2 835 aaKnown RBP2.02□□□□□ -2.09
KNL1-211ENST00000533001 NSUN6Q8TEA1 469 aaKnown RBP2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms