RNA–Protein interactions for RNA: ENST00000532844.5

CTNND1-234, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,012 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-234ENST00000532844 LRRC8BQ6P9F7 803 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 TADA2BQ86TJ2 420 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 OR6B3Q8NGW1 331 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 PITPNM3Q9BZ71 974 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 ASCC2Q9H1I8 757 aaPredicted RBP8.63□□□□□ -1.03
CTNND1-234ENST00000532844 SLITRK6Q9H5Y7 841 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 TDRD3Q9H7E2 651 aaKnown RBP8.63□□□□□ -1.03
CTNND1-234ENST00000532844 C10orf88Q9H8K7 445 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 TBC1D23Q9NUY8 699 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 REREQ9P2R6 1566 aa8.63□□□□□ -1.03
CTNND1-234ENST00000532844 TNS3Q68CZ2 1445 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 PLEKHG2Q9H7P9 1386 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ESRRBO95718 433 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ARPP19P56211 112 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ARL4CP56559 192 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 MAGOHP61326 146 aaKnown RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 SPARCL1Q14515 664 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 DRAP1Q14919 205 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ZNF667Q5HYK9 610 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 TMEM270Q6UE05 265 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 PRPF38AQ8NAV1 312 aaKnown RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 RAPGEF5Q92565 580 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 THAP11Q96EK4 314 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 RMDN3Q96TC7 470 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.62□□□□□ -1.034e-16■□□□□ 9.4
CTNND1-234ENST00000532844 GOLGA8MH3BSY2 632 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ORC4O43929 436 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ASNSP08243 561 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 MMP10P09238 476 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 MTF1Q14872 753 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ANO5Q75V66 913 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 PATL1Q86TB9 770 aaKnown RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 SRBD1Q8N5C6 995 aaKnown RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 TTC17Q96AE7 1141 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 NUDCD1Q96RS6 583 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 KLC2Q9H0B6 622 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 DCDC2Q9UHG0 476 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 SETD1BQ9UPS6 1966 aaKnown RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 WDR64B1ANS9 1081 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 NBPF26B4DH59 902 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 RASA4BC9J798 803 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ANKRD65E5RJM6 399 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 RASA4O43374 803 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 C21orf2O43822 256 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 SLC44A4Q53GD3 710 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ARMCX2Q7L311 632 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 NBPF15Q8N660 670 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 POLIQ9UNA4 740 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 MYO3AQ8NEV4 1616 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 A0A0G2JND7 137 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 A0A1W2PQC6 194 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 DCTN3O75935 186 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 OCM2P0CE71 109 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 OCMP0CE72 109 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 CUL3Q13618 768 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ZNF699Q32M78 642 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 ANKRD40Q6AI12 368 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 EPM2AIP1Q7L775 607 aaPredicted RBP8.62□□□□□ -1.03
CTNND1-234ENST00000532844 MTRQ99707 1265 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 KLHL31Q9H511 634 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 MID2Q9UJV3 735 aa8.62□□□□□ -1.03
CTNND1-234ENST00000532844 NPHP3-ACAD11A0A0J9YXS1 232 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 DENND3A2RUS2 1198 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 MYO1CO00159 1063 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 CLDN3O15551 220 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 ATP5HO75947 161 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 NKX1-1Q15270 411 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 HIF1AQ16665 826 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 QRICH1Q2TAL8 776 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 NAALADL2Q58DX5 795 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 SEPT12Q8IYM1 358 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 COQ7Q99807 217 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 C11orf70Q9BRQ4 267 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 KIAA1586Q9HCI6 787 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 NGRNQ9NPE2 291 aaKnown RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 TBC1D22BQ9NU19 505 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 ABCF3Q9NUQ8 709 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 CPSF3Q9UKF6 684 aaKnown RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 PXDNLA1KZ92 1463 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 TMEM247A6NEH6 219 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 COPEO14579 308 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 SUPT3HO75486 399 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 IREB2P48200 963 aaKnown RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 GPC3P51654 580 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 MKRN3Q13064 507 aaKnown RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 ARL13BQ3SXY8 428 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 PPP6R3Q5H9R7 873 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 ZNF746Q6NUN9 644 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 CRLF3Q8IUI8 442 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 SRRM1Q8IYB3 904 aaKnown RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 SYT2Q8N9I0 419 aaPredicted RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 MCPH1Q8NEM0 835 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 SPATA17Q96L03 361 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 LRRC37BQ96QE4 947 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 WDR24Q96S15 920 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 OSBPL1AQ9BXW6 950 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 DDX47Q9H0S4 455 aaKnown RBP8.61□□□□□ -1.03
CTNND1-234ENST00000532844 CALB1P05937 261 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 PPP2R2AP63151 447 aa8.61□□□□□ -1.03
CTNND1-234ENST00000532844 STXBP2Q15833 593 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms