RNA–Protein interactions for RNA: ENST00000532708.5

TRAF3IP2-212, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,956 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-212ENST00000532708 MRPL4Q9BYD3 311 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 PDZD7Q9H5P4 517 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 C1orf112Q9NSG2 853 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 EXOC1Q9NV70 894 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 PCDHB7Q9Y5E2 793 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 PCDHB2Q9Y5E7 798 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 MEIS3P2A8K0S8 358 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 PPP1R37O75864 691 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 PRPF6O94906 941 aaKnown RBP13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 NPTXRO95502 500 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 MYOGP15173 224 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 PBX2P40425 430 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 CRIPAKQ8N1N5 446 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 LPPQ93052 612 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 BICD1Q96G01 975 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 STRA6Q9BX79 667 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 ST6GALNAC4Q9H4F1 302 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 LRFN2Q9ULH4 789 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 HES2Q9Y543 173 aa13.09□□□□□ -0.31
TRAF3IP2-212ENST00000532708 A0A1W2PPC1 479 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 GJB5O95377 273 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 FGFR1P11362 822 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ATF7P17544 494 aaPredicted RBP13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 GATMP50440 423 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 STK4Q13043 487 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SLC27A1Q6PCB7 646 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZBTB33Q86T24 672 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SLC17A8Q8NDX2 589 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 GPT2Q8TD30 523 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TCHPQ9BT92 498 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TRIM6Q9C030 488 aaPredicted RBP13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PCDHB13Q9Y5F0 798 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PCDHA5Q9Y5H7 936 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SZT2Q5T011 3432 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CHD9Q3L8U1 2897 aa13.08□□□□□ -0.32
TRAF3IP2-212ENST00000532708 GBF1Q92538 1859 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TISP43B9A030 160 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 N4BP3O15049 544 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TLL1O43897 1013 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MCM4P33991 863 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 NPAS4Q8IUM7 802 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MAP4K3Q8IVH8 894 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SMG8Q8ND04 991 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TRAIPQ9BWF2 469 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 APOL6Q9BWW8 343 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RNF39Q9H2S5 420 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 NXF3Q9H4D5 531 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TMEM161AQ9NX61 479 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ANKFY1Q9P2R3 1169 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HOOK1Q9UJC3 728 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TNFSF13BQ9Y275 285 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 IPPQ9Y573 584 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ANKRD63C9JTQ0 380 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HNRNPDLO14979 420 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZNF623O75123 536 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 STAG3L1P0CL83 205 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HARSP12081 509 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MATR3P43243 847 aaKnown RBP eCLIP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 LIG4P49917 911 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 L1TD1Q5T7N2 865 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ISM2Q6H9L7 571 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 FAM43BQ6ZT52 329 aaPredicted RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 EPM2AIP1Q7L775 607 aaPredicted RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZNF598Q86UK7 904 aaKnown RBP13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 KIAA0895Q8NCT3 520 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 KCNN1Q92952 543 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CCDC51Q96ER9 411 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 YME1L1Q96TA2 773 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ADPGKQ9BRR6 497 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PBX4Q9BYU1 374 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HAPLN2Q9GZV7 340 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PTPRHQ9HD43 1115 aa13.07□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CHD7Q9P2D1 2997 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 LCHNA4D1U4 455 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 TOM1L1O75674 476 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 DGKIO75912 1065 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RHOBTB3O94955 611 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 EOMESO95936 686 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SKIP12755 728 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SCP2P22307 547 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 AKAP5P24588 427 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 HOXD13P35453 343 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 RAB27AP51159 221 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 LRIT3Q3SXY7 679 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZNF568Q3ZCX4 644 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 PAN2Q504Q3 1202 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SLC39A4Q6P5W5 647 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ZPBP2Q6X784 338 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 NELFCDQ8IXH7 590 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ELOA2Q8IYF1 753 aaPredicted RBP13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SYCP3Q8IZU3 236 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SCFD1Q8WVM8 642 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 SMARCE1Q969G3 411 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CCDC47Q96A33 483 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ACCSQ96QU6 501 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 CDT1Q9H211 546 aa13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 ELAC1Q9H777 363 aaKnown RBP13.06□□□□□ -0.32
TRAF3IP2-212ENST00000532708 MAPK8IP1Q9UQF2 711 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms