RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 COLEC11Q9BWP8 271 aa12.07□□□□□ -0.48
PTPRK-221ENST00000532331 PQBP1O60828 265 aaKnown RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 FTCDO95954 541 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ATXN8OSP0DMR3 200 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 EXOSC10Q01780 885 aaKnown RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 SEPT6Q14141 434 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 SNX17Q15036 470 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 NAALADL2Q58DX5 795 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ZWILCHQ9H900 591 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ASNSD1Q9NWL6 643 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ARHGAP42A6NI28 874 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 AKR1A1P14550 325 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ATP2C1P98194 919 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 FKBP1CQ5VVH2 108 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 RAPH1Q70E73 1250 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ALDH8A1Q9H2A2 487 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 EPB41L5Q9HCM4 733 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ANGPTL3Q9Y5C1 460 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 MYPNQ86TC9 1320 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 NWD1Q149M9 1564 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 CYP2C8P10632 490 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ACTR2P61160 394 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 SP3Q02447 781 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 RAD51Q06609 339 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 THOC5Q13769 683 aaKnown RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ZNF484Q5JVG2 852 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 PLA2G4FQ68DD2 849 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 PGBD3Q8N328 593 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 RNF10Q8N5U6 811 aaKnown RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 GMCL1Q96IK5 515 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 SEPT5Q99719 369 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ASCC2Q9H1I8 757 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ENTPD7Q9NQZ7 604 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 MOCS2O96007 188 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 CALB1P05937 261 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 PPP6R3Q5H9R7 873 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ATF7IP2Q5U623 682 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 SPATS2Q86XZ4 545 aaKnown RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 ZC3H15Q8WU90 426 aaKnown RBP12.06□□□□□ -0.48
PTPRK-221ENST00000532331 HDAC11Q96DB2 347 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 HINFPQ9BQA5 517 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 PPP1R12CQ9BZL4 782 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 XPNPEP3Q9NQH7 507 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 SPTLC3Q9NUV7 552 aa12.06□□□□□ -0.48
PTPRK-221ENST00000532331 FKBP1BP68106 108 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 IRX4P78413 519 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 IL9RQ01113 521 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 KIAA1755Q5JYT7 1200 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 RAB44Q7Z6P3 723 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 PHF20Q9BVI0 1012 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 KCND2Q9NZV8 630 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 A0A1B0GUA9 196 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 GAS2O43903 313 aaKnown RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 TM4SF1P30408 202 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 SDC4P31431 198 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 PLTPP55058 493 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 VGLL4Q14135 290 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 RBBP5Q15291 538 aaKnown RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 ARHGAP15Q53QZ3 475 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 ZNF746Q6NUN9 644 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 PTF1AQ7RTS3 328 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 DEFB128Q7Z7B8 93 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 PASD1Q8IV76 773 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 MTG1Q9BT17 334 aaPredicted RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 TUBE1Q9UJT0 475 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 SNX9Q9Y5X1 595 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 SART1O43290 800 aaKnown RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 LRG1P02750 347 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 PLS3P13797 630 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 SATB1Q01826 763 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 KCNQ5Q9NR82 932 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 SLC26A4O43511 780 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 ALDH1A3P47895 512 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 SH2D4BQ5SQS7 431 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 RHOT2Q8IXI1 618 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 STK38LQ9Y2H1 464 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 GLTPD2A6NH11 291 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 TXNDC9O14530 226 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 CHGBP05060 677 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 BASP1P80723 227 aaKnown RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 ALKBH5Q6P6C2 394 aaKnown RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 P2RX7Q99572 595 aaKnown RBP12.05□□□□□ -0.48
PTPRK-221ENST00000532331 LCMT1Q9UIC8 334 aa12.05□□□□□ -0.48
PTPRK-221ENST00000532331 NPTXRO95502 500 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 KRT3P12035 628 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 NMT1P30419 496 aaKnown RBP12.04□□□□□ -0.48
PTPRK-221ENST00000532331 GNA15P30679 374 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ST8SIA6P61647 398 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 SV2CQ496J9 727 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 STKLD1Q8NE28 680 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 PDCD6IPQ8WUM4 868 aaKnown RBP12.04□□□□□ -0.48
PTPRK-221ENST00000532331 TJP2Q9UDY2 1190 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 GPC4O75487 556 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 IL18RAPO95256 599 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ADORA2AP29274 412 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 MSH2P43246 934 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 WDR72Q3MJ13 1102 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 MGAT5BQ3V5L5 792 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 TRIM42Q8IWZ5 723 aa12.04□□□□□ -0.48
PTPRK-221ENST00000532331 ZNF512Q96ME7 567 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms