RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 NEDD9Q14511 834 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 EPC2Q52LR7 807 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 PARD3BQ8TEW8 1205 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 SLC20A1Q8WUM9 679 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 SLC7A3Q8WY07 619 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 MS4A4AQ96JQ5 239 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 TAS2R14Q9NYV8 317 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 ANKFY1Q9P2R3 1169 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 BZW2Q9Y6E2 419 aaKnown RBP16.48■□□□□ 0.23
SRPRA-206ENST00000532259 LRRC37A2A6NM11 1700 aa16.48■□□□□ 0.23
SRPRA-206ENST00000532259 PDHXO00330 501 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 LIG4P49917 911 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 VSNL1P62760 191 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 CETN1Q12798 172 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 ZBTB41Q5SVQ8 909 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
SRPRA-206ENST00000532259 CREG2Q8IUH2 290 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 LRRC71Q8N4P6 559 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 SEPT1Q8WYJ6 367 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 GPR20Q99678 358 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 PI4K2AQ9BTU6 479 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 PLEKHA4Q9H4M7 779 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 BTBD19C9JJ37 291 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 GJB1P08034 283 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 TARBP2Q15633 366 aaKnown RBP16.47■□□□□ 0.23
SRPRA-206ENST00000532259 KCTD19Q17RG1 926 aaPredicted RBP16.47■□□□□ 0.23
SRPRA-206ENST00000532259 TAF3Q5VWG9 929 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 VPS36Q86VN1 386 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 TMEM174Q8WUU8 243 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 C17orf75Q9HAS0 396 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 ST7Q9NRC1 585 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 BRCA2P51587 3418 aa16.47■□□□□ 0.23
SRPRA-206ENST00000532259 GRID2IPA4D2P6 1211 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 NOP56O00567 594 aaKnown RBP16.46■□□□□ 0.23
SRPRA-206ENST00000532259 CLSTN1O94985 981 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 CALCAP01258 141 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 DEPTORQ8TB45 409 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 TAS1R2Q8TE23 839 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 NIFKQ9BYG3 293 aaKnown RBP16.46■□□□□ 0.23
SRPRA-206ENST00000532259 MAF1Q9H063 256 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 CHORDC1Q9UHD1 332 aaPredicted RBP16.46■□□□□ 0.23
SRPRA-206ENST00000532259 TGFB3P10600 412 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 ARL2P36404 184 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 NLRP11P59045 1033 aaKnown RBP16.46■□□□□ 0.23
SRPRA-206ENST00000532259 CELF3Q5SZQ8 465 aaKnown RBP16.46■□□□□ 0.23
SRPRA-206ENST00000532259 SCARA3Q6AZY7 606 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 PNMA8AQ86V59 439 aaPredicted RBP16.46■□□□□ 0.23
SRPRA-206ENST00000532259 SPATA33Q96N06 139 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 TARS2Q9BW92 718 aaKnown RBP16.46■□□□□ 0.23
SRPRA-206ENST00000532259 PRDM10Q9NQV6 1147 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 HYOU1Q9Y4L1 999 aa16.46■□□□□ 0.23
SRPRA-206ENST00000532259 CCL15-CCL14A0A0B4J2E2 113 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 ZBTB42B2RXF5 422 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 SASH3O75995 380 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 TXNP10599 105 aaKnown RBP16.45■□□□□ 0.22
SRPRA-206ENST00000532259 RTP1P59025 263 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 STRN3Q13033 797 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 MKRN4PQ13434 485 aaPredicted RBP16.45■□□□□ 0.22
SRPRA-206ENST00000532259 CAPSQ13938 189 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 CCL15Q16663 113 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 BRDTQ58F21 947 aaPredicted RBP16.45■□□□□ 0.22
SRPRA-206ENST00000532259 CCDC181Q5TID7 509 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 CCDC62Q6P9F0 684 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 TXLNBQ8N3L3 684 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 RNF10Q8N5U6 811 aaKnown RBP16.45■□□□□ 0.22
SRPRA-206ENST00000532259 SLC17A8Q8NDX2 589 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 PRPF31Q8WWY3 499 aaKnown RBP16.45■□□□□ 0.22
SRPRA-206ENST00000532259 FBXL18Q96ME1 805 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 KREMEN1Q96MU8 473 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 AZI2Q9H6S1 392 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 OSGEPQ9NPF4 335 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 NENFQ9UMX5 172 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 K7ERI5 159 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 H2AFZP0C0S5 128 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 SRGAP2CP0DJJ0 459 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 GALCP54803 685 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 H2AFVQ71UI9 128 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 DHX37Q8IY37 1157 aaKnown RBP16.45■□□□□ 0.22
SRPRA-206ENST00000532259 ZNF516Q92618 1163 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 DHX38Q92620 1227 aaKnown RBP16.45■□□□□ 0.22
SRPRA-206ENST00000532259 ARFGAP3Q9NP61 516 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 CEP350Q5VT06 3117 aa16.45■□□□□ 0.22
SRPRA-206ENST00000532259 SCN4AP35499 1836 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 TNFAIP3P21580 790 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 CKAP4Q07065 602 aaKnown RBP16.44■□□□□ 0.22
SRPRA-206ENST00000532259 BMS1Q14692 1282 aaKnown RBP16.44■□□□□ 0.22
SRPRA-206ENST00000532259 SV2AQ7L0J3 742 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 GSPT2Q8IYD1 628 aaKnown RBP16.44■□□□□ 0.22
SRPRA-206ENST00000532259 GPD1LQ8N335 351 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 SLC30A5Q8TAD4 765 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 HVCN1Q96D96 273 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 MFSD14AQ96MC6 490 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 GDAP1L1Q96MZ0 367 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 SYT11Q9BT88 431 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 MROH8Q9H579 483 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 PTPRJQ12913 1337 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 ZRANB2O95218 330 aaKnown RBP eCLIP16.44■□□□□ 0.22
SRPRA-206ENST00000532259 ADORA2AP29274 412 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms