RNA–Protein interactions for RNA: ENST00000531539.5

FOXR1-202, Transcript of forkhead box R1, humanhuman

TSL 1 (best)

Gene FOXR1, Length 1,053 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1-202ENST00000531539 AFF1P51825 1210 aaKnown RBP15.94■□□□□ 0.14
FOXR1-202ENST00000531539 SMTNP53814 917 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 CSPP1Q1MSJ5 1256 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 NT5DC1Q5TFE4 455 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 URGCPQ8TCY9 931 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 LARP4BQ92615 738 aaKnown RBP15.94■□□□□ 0.14
FOXR1-202ENST00000531539 FAM193BQ96PV7 902 aaPredicted RBP15.94■□□□□ 0.14
FOXR1-202ENST00000531539 ZHX3Q9H4I2 956 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 PDZD7Q9H5P4 517 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 TMEM134Q9H6X4 195 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 C17orf75Q9HAS0 396 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 TBC1D13Q9NVG8 400 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 SPG21Q9NZD8 308 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 RBM19Q9Y4C8 960 aaKnown RBP15.94■□□□□ 0.14
FOXR1-202ENST00000531539 MORC2Q9Y6X9 1032 aaPredicted RBP15.94■□□□□ 0.14
FOXR1-202ENST00000531539 CNTNAP2Q9UHC6 1331 aa15.94■□□□□ 0.14
FOXR1-202ENST00000531539 FNDC1Q4ZHG4 1894 aaPredicted RBP15.93■□□□□ 0.14
FOXR1-202ENST00000531539 PPP6R2O75170 966 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 YEATS4O95619 227 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 EDN1P05305 212 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 BCAR1P56945 870 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 KRT17Q04695 432 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 DNM1Q05193 864 aaKnown RBP15.93■□□□□ 0.14
FOXR1-202ENST00000531539 CAMK1Q14012 370 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 GIT2Q14161 759 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 TCEAL5Q5H9L2 206 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 EEF1DP3Q658K8 133 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 SV2BQ7L1I2 683 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 ZNF280BQ86YH2 543 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 HACE1Q8IYU2 909 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 MYCT1Q8N699 235 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 PDILTQ8N807 584 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 GAD1Q99259 594 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 ADPGKQ9BRR6 497 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 NTPCRQ9BSD7 190 aaKnown RBP15.93■□□□□ 0.14
FOXR1-202ENST00000531539 NXF3Q9H4D5 531 aaKnown RBP15.93■□□□□ 0.14
FOXR1-202ENST00000531539 IGFLR1Q9H665 355 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 NRDE2Q9H7Z3 1164 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 MIOSQ9NXC5 875 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 KLK14Q9P0G3 267 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 KANSL3Q9P2N6 904 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 PUF60Q9UHX1 559 aaKnown RBP15.93■□□□□ 0.14
FOXR1-202ENST00000531539 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 ZDHHC9Q9Y397 364 aa15.93■□□□□ 0.14
FOXR1-202ENST00000531539 TRANK1O15050 2925 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 ARL5CA6NH57 179 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 CUTAO60888 179 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 ZC3H11AO75152 810 aaKnown RBP eCLIP15.92■□□□□ 0.14
FOXR1-202ENST00000531539 DDHD2O94830 711 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 FAM13AO94988 1023 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 BRD1O95696 1058 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 TIGD5Q53EQ6 642 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 ATF7IP2Q5U623 682 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 ATL3Q6DD88 541 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 EP400NLQ6ZTU2 488 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 SPIRE2Q8WWL2 714 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 RSPH1Q8WYR4 309 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 HLA-CQ95604 372 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 REEP2Q9BRK0 252 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 TCHPQ9BT92 498 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 NSUN3Q9H649 340 aaKnown RBP15.92■□□□□ 0.14
FOXR1-202ENST00000531539 LARSQ9P2J5 1176 aaKnown RBP15.92■□□□□ 0.14
FOXR1-202ENST00000531539 GIT1Q9Y2X7 761 aa15.92■□□□□ 0.14
FOXR1-202ENST00000531539 NLRC5Q86WI3 1866 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ALDH2P05091 517 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 IRS1P35568 1242 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ME1P48163 572 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ERVFC1P60507 584 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 PLCB3Q01970 1234 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 STRN3Q13033 797 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 CCDC73Q6ZRK6 1079 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 DYMQ7RTS9 669 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 TAS1R3Q7RTX0 852 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ZBTB33Q86T24 672 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 MRPS27Q92552 414 aaKnown RBP15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ZFP42Q96MM3 310 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ACO2Q99798 780 aaKnown RBP15.91■□□□□ 0.14
FOXR1-202ENST00000531539 TARS2Q9BW92 718 aaKnown RBP15.91■□□□□ 0.14
FOXR1-202ENST00000531539 SNTG2Q9NY99 539 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ARHGAP28Q9P2N2 729 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 THEGQ9P2T0 379 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 DNAJB4Q9UDY4 337 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 STK17AQ9UEE5 414 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 ODF2LQ9ULJ1 636 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 TNFSF13BQ9Y275 285 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 MYO7AQ13402 2215 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 COL6A3P12111 3177 aa15.91■□□□□ 0.14
FOXR1-202ENST00000531539 A0A087X0B3 334 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 TBCAO75347 108 aaKnown RBP15.9■□□□□ 0.14
FOXR1-202ENST00000531539 GALTP07902 379 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 PPM1AP35813 382 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 MLH1P40692 756 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 STAT6P42226 847 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 SLC11A1P49279 550 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 SCNN1GP51170 649 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 MRPS5P82675 430 aaKnown RBP15.9■□□□□ 0.14
FOXR1-202ENST00000531539 TFF2Q03403 129 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 UBE3AQ05086 875 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 HAUS6Q7Z4H7 955 aa15.9■□□□□ 0.14
FOXR1-202ENST00000531539 APBB1IPQ7Z5R6 666 aaPredicted RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms