RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 NTRK3Q16288 839 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 ECM1Q16610 540 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 PTPROQ16827 1216 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 TIGD5Q53EQ6 642 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 WWC2Q6AWC2 1192 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 RPAINQ86UA6 219 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 VSIG10LQ86VR7 867 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 SESTD1Q86VW0 696 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 IL22RA1Q8N6P7 574 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 C7orf31Q8N865 590 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 CEP120Q8N960 986 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 MFSD14AQ96MC6 490 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 IWS1Q96ST2 819 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 PDCD2LQ9BRP1 358 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 TM6SF1Q9BZW5 370 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 RASSF4Q9H2L5 321 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 CHRDQ9H2X0 955 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 PSTPIP2Q9H939 334 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 MAP3K20Q9NYL2 800 aaKnown RBP8□□□□□ -1.13
TRIM53CP-201ENST00000531490 RTEL1Q9NZ71 1219 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 GTF2IRD1Q9UHL9 959 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 INSL6Q9Y581 213 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 CYP46A1Q9Y6A2 500 aa8□□□□□ -1.13
TRIM53CP-201ENST00000531490 TRIP12Q14669 1992 aaPredicted RBP8□□□□□ -1.13
TRIM53CP-201ENST00000531490 LOC102724159A0A0B4J2E5 919 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 C9orf172C9J069 976 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 H3BNC9 293 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 LINC01565O15544 149 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 DEAF1O75398 565 aaPredicted RBP7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 EIF3JO75822 258 aaKnown RBP7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 GH1P01241 217 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 THPOP40225 353 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 METAP2P50579 478 aaKnown RBP eCLIP7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 MRPS9P82933 396 aaKnown RBP7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 SP2Q02086 613 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 TCF15Q12870 199 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 STK3Q13188 491 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 COL19A1Q14993 1142 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 PWP2Q15269 919 aaKnown RBP7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 PKN1Q16512 942 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 UBE2SQ16763 222 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 KIAA0753Q2KHM9 967 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 HEATR3Q7Z4Q2 680 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 TMEM192Q8IY95 271 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 PHKBQ93100 1093 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 YME1L1Q96TA2 773 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 MAF1Q9H063 256 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 PDRG1Q9NUG6 133 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 RBM28Q9NW13 759 aaKnown RBP7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 SEC63Q9UGP8 760 aaKnown RBP7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 SALL4Q9UJQ4 1053 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 SCN10AQ9Y5Y9 1956 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 TECTAO75443 2155 aa7.99□□□□□ -1.13
TRIM53CP-201ENST00000531490 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 H3BRB1 525 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 STXBP3O00186 592 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 GRM6O15303 877 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 AMHP03971 560 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 CTSHP09668 335 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 FURINP09958 794 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 CES1P23141 567 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 HYAL1Q12794 435 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 TRAF1Q13077 416 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 DOC2BQ14184 412 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 SMAD2Q15796 467 aaKnown RBP7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 HERC4Q5GLZ8 1057 aaPredicted RBP7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 CEP135Q66GS9 1140 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 ADAMTSL4Q6UY14 1074 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 SAMD3Q8N6K7 520 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 SMARCC2Q8TAQ2 1214 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 PGBD1Q96JS3 809 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 KCNH6Q9H252 994 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 NSUN3Q9H649 340 aaKnown RBP7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 TUT1Q9H6E5 874 aaKnown RBP7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 PRKAG3Q9UGI9 489 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 DDX41Q9UJV9 622 aaKnown RBP7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 TELO2Q9Y4R8 837 aa7.98□□□□□ -1.13
TRIM53CP-201ENST00000531490 SMCO2A6NFE2 343 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 TMEM221A6NGB7 291 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 RSPH10B2B2RC85 870 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 B4DLN1 442 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 M0R296 226 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 HAS3O00219 553 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 PRPF3O43395 683 aaKnown RBP7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 MBTPS2O43462 519 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 EFCAB14O75071 495 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 TBX10O75333 385 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 TNFRSF21O75509 655 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 F2P00734 622 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 RSPH10BP0C881 870 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 MRPL12P52815 198 aaKnown RBP7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 RCAN1P53805 252 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 VCPP55072 806 aaKnown RBP7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 DGKDQ16760 1214 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 PFKFB3Q16875 520 aaPredicted RBP7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 PLEKHG4Q58EX7 1191 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 GLYCTKQ8IVS8 523 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 DHX37Q8IY37 1157 aaKnown RBP7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 EDAQ92838 391 aa7.97□□□□□ -1.13
TRIM53CP-201ENST00000531490 IL17RAQ96F46 866 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms