RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 GALTP07902 379 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 GTF2F1P35269 517 aaKnown RBP eCLIP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 PBX3P40426 434 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 GIT2Q14161 759 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 SMC1AQ14683 1233 aaKnown RBP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 ECM1Q16610 540 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 DUSP6Q16828 381 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 TMEM132AQ24JP5 1023 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 CDCA2Q69YH5 1023 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 ATL3Q6DD88 541 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 DDX53Q86TM3 631 aaKnown RBP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 FAM178BQ8IXR5 827 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 GJD3Q8N144 294 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 MRPL43Q8N983 215 aaKnown RBP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 SMG8Q8ND04 991 aaKnown RBP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 CPB2Q96IY4 423 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 AK8Q96MA6 479 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 NECAB3Q96P71 396 aaPredicted RBP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 TMEM175Q9BSA9 504 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 EIF2AQ9BY44 585 aaKnown RBP12.13□□□□□ -0.47
CAPN1-221ENST00000531068 NT5C3AQ9H0P0 336 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 GBP3Q9H0R5 595 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 RCOR1Q9UKL0 485 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 FAN1Q9Y2M0 1017 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 IPPQ9Y573 584 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 ATP6V1DQ9Y5K8 247 aa12.13□□□□□ -0.47
CAPN1-221ENST00000531068 ARL5CA6NH57 179 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 MEIS3P2A8K0S8 358 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 NT5C1B-RDH14C9J2C7 533 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 ACKR2O00590 384 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 N4BP3O15049 544 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 PER2O15055 1255 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 INPPL1O15357 1258 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 SLC26A4O43511 780 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 CXCL14O95715 111 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 COASYQ13057 564 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 SMAD4Q13485 552 aaKnown RBP12.12□□□□□ -0.47
CAPN1-221ENST00000531068 PRPF4BQ13523 1007 aaKnown RBP12.12□□□□□ -0.47
CAPN1-221ENST00000531068 IL17AQ16552 155 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 PLPP4Q5VZY2 271 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 APBB1IPQ7Z5R6 666 aaPredicted RBP12.12□□□□□ -0.47
CAPN1-221ENST00000531068 ZNF280BQ86YH2 543 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 IGSF21Q96ID5 467 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 CDK5RAP3Q96JB5 506 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 ADPGKQ9BRR6 497 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 TIPINQ9BVW5 301 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 C17orf75Q9HAS0 396 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 GBF1Q92538 1859 aa12.12□□□□□ -0.47
CAPN1-221ENST00000531068 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 PTPRSQ13332 1948 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 VWA3AA6NCI4 1184 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 E9PMD0 336 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 K7ERI5 159 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 LINC01565O15544 149 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 B4GALT5O43286 388 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 DDHD2O94830 711 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 NPTXRO95502 500 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 POMCP01189 267 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 IL9P15248 144 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 CDC25AP30304 524 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 SSTR3P32745 418 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 SLC11A1P49279 550 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 NASPP49321 788 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 DLX2Q07687 328 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 ZRSR1Q15695 479 aaKnown RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 SMAD2Q15796 467 aaKnown RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 HYIQ5T013 277 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 TMEM184AQ6ZMB5 413 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 ADHFE1Q8IWW8 467 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 VPS52Q8N1B4 723 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 MSLNLQ96KJ4 702 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 DRC1Q96MC2 740 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 USP28Q96RU2 1077 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 GAD1Q99259 594 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 POP1Q99575 1024 aaKnown RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 C1QTNF1Q9BXJ1 281 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 RNF39Q9H2S5 420 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 CLEC1BQ9P126 229 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 PARP2Q9UGN5 583 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 PCDHGC5Q9Y5F6 944 aa12.11□□□□□ -0.47
CAPN1-221ENST00000531068 MORC2Q9Y6X9 1032 aaPredicted RBP12.11□□□□□ -0.47
CAPN1-221ENST00000531068 MYH15Q9Y2K3 1946 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 C2orf71A6NGG8 1288 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 PP2D1A8MPX8 630 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 HIDE1A8MVS5 230 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 NRP1O14786 923 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 MBTPS2O43462 519 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 TBX10O75333 385 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 PRKCBP05771 671 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 CTSAP10619 480 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 HOXB8P17481 243 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-221ENST00000531068 CA8P35219 290 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 MLH1P40692 756 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 UBA7P41226 1012 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 AFF1P51825 1210 aaKnown RBP12.1□□□□□ -0.47
CAPN1-221ENST00000531068 DMP1Q13316 513 aaPredicted RBP12.1□□□□□ -0.47
CAPN1-221ENST00000531068 PTPAQ15257 358 aa12.1□□□□□ -0.47
CAPN1-221ENST00000531068 CLUL1Q15846 466 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms