RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 SEMA4AQ9H3S1 761 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 SELENONQ9NZV5 590 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 STXBP5LQ9Y2K9 1186 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 GIT1Q9Y2X7 761 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 TRIM17Q9Y577 477 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 NR2E3Q9Y5X4 410 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ADAMTS7Q9UKP4 1686 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 DISP2A7MBM2 1401 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 SSU72P8A0A1W2PR75 194 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 EXOC3O60645 756 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ZBED1O96006 694 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 TMED10P49755 219 aaKnown RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 PSMC1P62191 440 aaKnown RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 TFCP2Q12800 502 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 MOGSQ13724 837 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 TGFBIQ15582 683 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ESCO1Q5FWF5 840 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 SPDYAQ5MJ70 313 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 METTL21CQ5VZV1 264 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 DUPD1Q68J44 220 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 BARGINQ6ZT62 677 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 RRAGAQ7L523 313 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 MICU3Q86XE3 530 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ARHGAP24Q8N264 748 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CCDC82Q8N4S0 544 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 NCOA7Q8NI08 942 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CXorf38Q8TB03 319 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ANKS1AQ92625 1134 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CCDC127Q96BQ5 260 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ITPKCQ96DU7 683 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CNOT6LQ96LI5 555 aaKnown RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 CCT7Q99832 543 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 HGH1Q9BTY7 390 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 PITPNM3Q9BZ71 974 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 MRPL46Q9H2W6 279 aaKnown RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 FAM207AQ9NSI2 230 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 ZNHIT2Q9UHR6 403 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 DENND2AQ9ULE3 1009 aa8.32□□□□□ -1.08
PTPRK-219ENST00000531050 GPC6Q9Y625 555 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-219ENST00000531050 A0A1W2PQ67 120 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 FAM205CA6NFA0 338 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 FOXO6A8MYZ6 492 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 NBPF26B4DH59 902 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 RASA4BC9J798 803 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 GSC2O15499 205 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 RASA4O43374 803 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 DCTN3O75935 186 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 PGM3O95394 542 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 HSPA8P11142 646 aaKnown RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 SLC5A2P31639 672 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 CTC1Q2NKJ3 1217 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 TAF1BQ53T94 588 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 BPHLQ86WA6 291 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 METTL13Q8N6R0 699 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 SLC43A3Q8NBI5 491 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 GIPC3Q8TF64 312 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 STARD8Q92502 1023 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 STMN2Q93045 179 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 VPS50Q96JG6 964 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 NEURL2Q9BR09 285 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 NOC4LQ9BVI4 516 aaKnown RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 GOLPH3Q9H4A6 298 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 CABP5Q9NP86 173 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 ANGPTL2Q9UKU9 493 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 DOLKQ9UPQ8 538 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 CARD8Q9Y2G2 431 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 STARD13Q9Y3M8 1113 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 CTDP1Q9Y5B0 961 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 TFAP2AP05549 437 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 CYP2C9P11712 490 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 MSLNQ13421 630 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 KCTD21Q4G0X4 260 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 PDXDC1Q6P996 788 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 TMTC3Q6ZXV5 915 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 KRT27Q7Z3Y8 459 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 RALYLQ86SE5 291 aaKnown RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 SFR1Q86XK3 245 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 CROCCP3Q8IVE0 287 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 RASGEF1CQ8N431 466 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 CSGALNACT2Q8N6G5 542 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 METTL25Q8N6Q8 603 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 ZFP28Q8NHY6 868 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 PRPF31Q8WWY3 499 aaKnown RBP8.31□□□□□ -1.08
PTPRK-219ENST00000531050 PACSIN1Q9BY11 444 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 NDEL1Q9GZM8 345 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 USP40Q9NVE5 1235 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 QPCTLQ9NXS2 382 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 DKK3Q9UBP4 350 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 PRELID1Q9Y255 219 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 MAP3K2Q9Y2U5 619 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 NUMBLQ9Y6R0 609 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 LMTK3Q96Q04 1460 aa8.31□□□□□ -1.08
PTPRK-219ENST00000531050 UTYO14607 1347 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 PITPNM2Q9BZ72 1349 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 FUOMA2VDF0 154 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 TRIM75PA6NK02 468 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 BTBD11A6QL63 1104 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 GRM8O00222 908 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 RIPK2O43353 540 aa8.3□□□□□ -1.08
PTPRK-219ENST00000531050 MGEA5O60502 916 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms