RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 ZNF318Q5VUA4 2279 aa17.54■□□□□ 0.4
CPSF1-205ENST00000531042 ARF4P18085 180 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-205ENST00000531042 SP100P23497 879 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-205ENST00000531042 MTHFRP42898 656 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 PTPN21Q16825 1174 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 RARS2Q5T160 578 aaKnown RBP17.53■□□□□ 0.4
CPSF1-205ENST00000531042 CATSPER3Q86XQ3 398 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 C12orf76Q8N812 135 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-205ENST00000531042 C8orf76Q96K31 380 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 FBXL18Q96ME1 805 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 LLPHQ9BRT6 129 aaKnown RBP17.53■□□□□ 0.4
CPSF1-205ENST00000531042 POLR3FQ9H1D9 316 aaPredicted RBP17.53■□□□□ 0.4
CPSF1-205ENST00000531042 TUFT1Q9NNX1 390 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 NR2E1Q9Y466 385 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 HES2Q9Y543 173 aa17.53■□□□□ 0.4
CPSF1-205ENST00000531042 ARL5CA6NH57 179 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 USO1O60763 962 aaKnown RBP17.52■□□□□ 0.4
CPSF1-205ENST00000531042 LILRB3O75022 631 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 MED24O75448 989 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 SIGLEC14Q08ET2 396 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 PPFIBP1Q86W92 1011 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 COLGALT2Q8IYK4 626 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 PBXIP1Q96AQ6 731 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 RIPOR3Q96MK2 946 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 KLHL5Q96PQ7 755 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 GAD1Q99259 594 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 POLR3CQ9BUI4 534 aaPredicted RBP17.52■□□□□ 0.4
CPSF1-205ENST00000531042 TSHZ2Q9NRE2 1034 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 MARCH5Q9NX47 278 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 MIOSQ9NXC5 875 aa17.52■□□□□ 0.4
CPSF1-205ENST00000531042 DBR1Q9UK59 544 aaKnown RBP17.52■□□□□ 0.4
CPSF1-205ENST00000531042 TDRD15B5MCY1 1934 aaKnown RBP17.52■□□□□ 0.4
CPSF1-205ENST00000531042 B4GALT5O43286 388 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 SSBP05455 408 aaKnown RBP eCLIP17.51■□□□□ 0.39
CPSF1-205ENST00000531042 WEE2P0C1S8 567 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 MLH1P40692 756 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 DSC1Q08554 894 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 ORC2Q13416 577 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-205ENST00000531042 ZNF174Q15697 407 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 KIAA1841Q6NSI8 718 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 KANK3Q6NY19 840 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 NACC1Q96RE7 527 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 EMILIN2Q9BXX0 1053 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 TRIM6Q9C030 488 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-205ENST00000531042 FOXP1Q9H334 677 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-205ENST00000531042 GPRC5CQ9NQ84 441 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 MRPL17Q9NRX2 175 aaKnown RBP17.51■□□□□ 0.39
CPSF1-205ENST00000531042 GIT1Q9Y2X7 761 aa17.51■□□□□ 0.39
CPSF1-205ENST00000531042 PRG3Q9Y2Y8 225 aaPredicted RBP17.51■□□□□ 0.39
CPSF1-205ENST00000531042 A0A1B0GUA9 196 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 C2CD4DB7Z1M9 353 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 EFEMP2O95967 443 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 SOD2P04179 222 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 CNPP09543 421 aaKnown RBP17.5■□□□□ 0.39
CPSF1-205ENST00000531042 OR52Z1P0C646 297 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 KLRC2P26717 231 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 OR1G1P47890 313 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 SCNN1GP51170 649 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 CLCN4P51793 760 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 ATAT1Q5SQI0 421 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 SLC27A1Q6PCB7 646 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 MAEAQ7L5Y9 396 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 CABP7Q86V35 215 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 CDR2LQ86X02 465 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-205ENST00000531042 HACE1Q8IYU2 909 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 MCPH1Q8NEM0 835 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 FBXO18Q8NFZ0 1043 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 ASIC4Q96FT7 647 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 ZSCAN31Q96LW9 406 aaPredicted RBP17.5■□□□□ 0.39
CPSF1-205ENST00000531042 ZFP42Q96MM3 310 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 APOL6Q9BWW8 343 aa17.5■□□□□ 0.39
CPSF1-205ENST00000531042 NXF3Q9H4D5 531 aaKnown RBP17.5■□□□□ 0.39
CPSF1-205ENST00000531042 LRRIQ4A6NIV6 560 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 NPTXRO95502 500 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 RPA1P27694 616 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
CPSF1-205ENST00000531042 NHLH1Q02575 133 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 POTEGQ6S5H5 508 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 TAS1R1Q7RTX1 841 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 ZBTB33Q86T24 672 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 RNF168Q8IYW5 571 aaPredicted RBP17.49■□□□□ 0.39
CPSF1-205ENST00000531042 GSTCDQ8NEC7 633 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 KIF2CQ99661 725 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 HERC2P3Q9BVR0 1158 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 SFXN1Q9H9B4 322 aa17.49■□□□□ 0.39
CPSF1-205ENST00000531042 DENND4AQ7Z401 1863 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 C2CD2LO14523 706 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 URODP06132 367 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 AKAP5P24588 427 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 RBM25P49756 843 aaKnown RBP17.48■□□□□ 0.39
CPSF1-205ENST00000531042 TTC38Q5R3I4 469 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 CDCA2Q69YH5 1023 aaPredicted RBP17.48■□□□□ 0.39
CPSF1-205ENST00000531042 TMC5Q6UXY8 1006 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 PPP4R3CPQ6ZMV5 832 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 NOSTRINQ8IVI9 506 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 SUGP1Q8IWZ8 645 aaKnown RBP17.48■□□□□ 0.39
CPSF1-205ENST00000531042 FBXL6Q8N531 539 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 ERMNQ8TAM6 284 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 FEZF2Q8TBJ5 459 aa17.48■□□□□ 0.39
CPSF1-205ENST00000531042 PRIMPOLQ96LW4 560 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms