RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 TSPAN1O60635 241 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 PFKFB2O60825 505 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 NR1I2O75469 434 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 ADH1AP07327 375 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 NCLP19338 710 aaKnown RBP17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 HOXA11P31270 313 aaPredicted RBP17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 SCNN1GP51170 649 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 NR5A1Q13285 461 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 MXD4Q14582 209 aaPredicted RBP17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 CALCRLQ16602 461 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 OTOP3Q7RTS5 596 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 MRPL10Q7Z7H8 261 aaKnown RBP17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 HACE1Q8IYU2 909 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 CNNM3Q8NE01 707 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 HERC2P3Q9BVR0 1158 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 USTQ9Y2C2 406 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 HES2Q9Y543 173 aa17.61■□□□□ 0.41
CHMP4A-204ENST00000530996 ARL5CA6NH57 179 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 ZBTB39O15060 712 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 GALR2O43603 387 aaPredicted RBP17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 SOD2P04179 222 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 MYBP10242 640 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 GLUD2P49448 558 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 ANKRD1Q15327 319 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 EARS2Q5JPH6 523 aaKnown RBP17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 GPR149Q86SP6 731 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 SMG8Q8ND04 991 aaKnown RBP17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 FLCNQ8NFG4 579 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 FEZF2Q8TBJ5 459 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 CCDC51Q96ER9 411 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 GAD1Q99259 594 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 EIF2AK1Q9BQI3 630 aaKnown RBP17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 FBXL21Q9UKT6 434 aa17.6■□□□□ 0.41
CHMP4A-204ENST00000530996 ST18O60284 1047 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 USO1O60763 962 aaKnown RBP17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 GLUD1P00367 558 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 RFX1P22670 979 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 AXLP30530 894 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 SPIRE1Q08AE8 756 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 CAPSQ13938 189 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 TRIM29Q14134 588 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 TMEM105Q8N8V8 129 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 ASAP3Q8TDY4 903 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 ZFP42Q96MM3 310 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 NXF3Q9H4D5 531 aaKnown RBP17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 XPNPEP1Q9NQW7 623 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 MARCH5Q9NX47 278 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 SSX2IPQ9Y2D8 614 aa17.59■□□□□ 0.41
CHMP4A-204ENST00000530996 NEMFO60524 1076 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 NEFLP07196 543 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 GBP2P32456 591 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 NUBP1P53384 320 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 PTENP60484 403 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 PCBP1Q15365 356 aaKnown RBP eCLIP17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 TMEM132AQ24JP5 1023 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 ASTLQ6HA08 431 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 COLGALT2Q8IYK4 626 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 RPS6KC1Q96S38 1066 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 CSRNP2Q9H175 543 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 POLR3FQ9H1D9 316 aaPredicted RBP17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 DPP7Q9UHL4 492 aa17.58■□□□□ 0.4
CHMP4A-204ENST00000530996 LRRIQ4A6NIV6 560 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 F8W810 466 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 INPPL1O15357 1258 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 TEX28O15482 410 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 DGAT1O75907 488 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 CTDNEP1O95476 244 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 NPTXRO95502 500 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 TXKP42681 527 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 MBTD1Q05BQ5 628 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 C15orf39Q6ZRI6 1047 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 GLYCTKQ8IVS8 523 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 NECAB1Q8N987 351 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 STAMQ92783 540 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 RNF39Q9H2S5 420 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 PARP2Q9UGN5 583 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 PCDHA12Q9UN75 941 aa17.57■□□□□ 0.4
CHMP4A-204ENST00000530996 CLUHO75153 1309 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 B4GALT5O43286 388 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 SLITRK3O94933 977 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 ARF4P18085 180 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 AKAP5P24588 427 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 TDGQ13569 410 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 MAEAQ7L5Y9 396 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 TAS1R1Q7RTX1 841 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 CDR2LQ86X02 465 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 DIS3L2Q8IYB7 885 aaKnown RBP17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 PIGOQ8TEQ8 1089 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 TTC12Q9H892 705 aaPredicted RBP17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 PIDD1Q9HB75 910 aa17.56■□□□□ 0.4
CHMP4A-204ENST00000530996 CCDC195A0A1B0GUA6 201 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 POTEMA6NI47 508 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 STK25O00506 426 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 ATP2B1P20020 1258 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 DSC1Q08554 894 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 SLC27A1Q6PCB7 646 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 SIX5Q8N196 739 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 SMG7Q92540 1137 aaKnown RBP17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 GTF3C6Q969F1 213 aa17.55■□□□□ 0.4
CHMP4A-204ENST00000530996 B3GALT6Q96L58 329 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms