RNA–Protein interactions for RNA: ENST00000530758.1

BRK1-201, Transcript of BRICK1, SCAR/WAVE actin nucleating complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRK1, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRK1-201ENST00000530758 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
BRK1-201ENST00000530758 ABLIM1O14639 778 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 SMC2O95347 1197 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 EOMESO95936 686 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 SKIP12755 728 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 RAB27AP51159 221 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 STK4Q13043 487 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 BMT2Q1RMZ1 405 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 L1TD1Q5T7N2 865 aaKnown RBP17.61■□□□□ 0.41
BRK1-201ENST00000530758 SLC27A1Q6PCB7 646 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 STXBP4Q6ZWJ1 553 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 MRPL10Q7Z7H8 261 aaKnown RBP17.61■□□□□ 0.41
BRK1-201ENST00000530758 HPS3Q969F9 1004 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 CCDC47Q96A33 483 aaKnown RBP17.61■□□□□ 0.41
BRK1-201ENST00000530758 SLC9A7Q96T83 725 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 GTPBP4Q9BZE4 634 aaKnown RBP17.61■□□□□ 0.41
BRK1-201ENST00000530758 CLSTN2Q9H4D0 955 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 EXOC1Q9NV70 894 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 RMND1Q9NWS8 449 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 TBC1D7Q9P0N9 293 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 STYXL1Q9Y6J8 313 aa17.61■□□□□ 0.41
BRK1-201ENST00000530758 N4BP3O15049 544 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 TOM1L1O75674 476 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 GCNT3O95395 438 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 AMHP03971 560 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 MYBP10242 640 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 PTMSP20962 102 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 HOXD13P35453 343 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 KCNJ6P48051 423 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 COBLL1Q53SF7 1204 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 ATF7IP2Q5U623 682 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 ZNF598Q86UK7 904 aaKnown RBP17.6■□□□□ 0.41
BRK1-201ENST00000530758 KIAA0895Q8NCT3 520 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 SCFD1Q8WVM8 642 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 SMARCE1Q969G3 411 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 CPB2Q96IY4 423 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 RNPC3Q96LT9 517 aaKnown RBP17.6■□□□□ 0.41
BRK1-201ENST00000530758 ACCSQ96QU6 501 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 TARS2Q9BW92 718 aaKnown RBP17.6■□□□□ 0.41
BRK1-201ENST00000530758 PDZD7Q9H5P4 517 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 TMEM206Q9H813 350 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 FAM105AQ9NUU6 356 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 SLC4A7Q9Y6M7 1214 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 UBE4BO95155 1302 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 COL6A3P12111 3177 aa17.6■□□□□ 0.41
BRK1-201ENST00000530758 SNRPFP62306 86 aaKnown RBP17.59■□□□□ 0.41
BRK1-201ENST00000530758 DEFB103AP81534 67 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 KCNA1Q09470 495 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 EEF1DP3Q658K8 133 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 TWF2Q6IBS0 349 aaKnown RBP17.59■□□□□ 0.41
BRK1-201ENST00000530758 ECHDC2Q86YB7 292 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 GLIS3Q8NEA6 775 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 TMEM174Q8WUU8 243 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 SLC39A2Q9NP94 309 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 TMEM161AQ9NX61 479 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 EXOC7Q9UPT5 735 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 USP20Q9Y2K6 914 aa17.59■□□□□ 0.41
BRK1-201ENST00000530758 PRPF6O94906 941 aaKnown RBP17.58■□□□□ 0.4
BRK1-201ENST00000530758 STAG3L1P0CL83 205 aa17.58■□□□□ 0.4
BRK1-201ENST00000530758 MCL1Q07820 350 aa17.58■□□□□ 0.4
BRK1-201ENST00000530758 ZNF658Q5TYW1 1059 aaPredicted RBP17.58■□□□□ 0.4
BRK1-201ENST00000530758 SLC39A4Q6P5W5 647 aa17.58■□□□□ 0.4
BRK1-201ENST00000530758 NPAS4Q8IUM7 802 aa17.58■□□□□ 0.4
BRK1-201ENST00000530758 DEFB123Q8N688 67 aa17.58■□□□□ 0.4
BRK1-201ENST00000530758 SMG8Q8ND04 991 aaKnown RBP17.58■□□□□ 0.4
BRK1-201ENST00000530758 EIF2AQ9BY44 585 aaKnown RBP17.58■□□□□ 0.4
BRK1-201ENST00000530758 PCDHB2Q9Y5E7 798 aa17.58■□□□□ 0.4
BRK1-201ENST00000530758 FNDC1Q4ZHG4 1894 aaPredicted RBP17.58■□□□□ 0.4
BRK1-201ENST00000530758 GBF1Q92538 1859 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 ZBBXA8MT70 800 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 GJB5O95377 273 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 MCF2P10911 925 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 ATF7P17544 494 aaPredicted RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 HTRA4P83105 476 aaPredicted RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 CAMK4Q16566 473 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 DCAF4L1Q3SXM0 396 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 SLFN12LQ6IEE8 588 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 MPZL3Q6UWV2 235 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 RBM43Q6ZSC3 357 aaKnown RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 APBB1IPQ7Z5R6 666 aaPredicted RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 HERC6Q8IVU3 1022 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 TRIML1Q8N9V2 468 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 RSPH1Q8WYR4 309 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 ERCC4Q92889 916 aaPredicted RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 ZNF689Q96CS4 500 aaPredicted RBP17.57■□□□□ 0.4
BRK1-201ENST00000530758 ADPGKQ9BRR6 497 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 HAPLN2Q9GZV7 340 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 NUP62CLQ9H1M0 184 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 MTMR10Q9NXD2 777 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 PCDHB7Q9Y5E2 793 aa17.57■□□□□ 0.4
BRK1-201ENST00000530758 ZMYM2Q9UBW7 1377 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 A0A0B4J269 797 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 ANKRD63C9JTQ0 380 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 HNRNPDLO14979 420 aaKnown RBP17.56■□□□□ 0.4
BRK1-201ENST00000530758 CLDN3O15551 220 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 DGKIO75912 1065 aa17.56■□□□□ 0.4
BRK1-201ENST00000530758 KIF20AO95235 890 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms