RNA–Protein interactions for RNA: ENST00000530748.5

CTNND1-227, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-227ENST00000530748 AGPAT1Q99943 283 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 DDX50Q9BQ39 737 aaKnown RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 AGO2Q9UKV8 859 aaKnown RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 INTUQ9ULD6 942 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 POLIQ9UNA4 740 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 NPHP3-ACAD11A0A0J9YXS1 232 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 SULT1E1P49888 294 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 SLC10A5Q5PT55 438 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 NUGGCQ68CJ6 796 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 NEDD1Q8NHV4 660 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 KIF12Q96FN5 646 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 EIF2AQ9BY44 585 aaKnown RBP9.01□□□□□ -0.97
CTNND1-227ENST00000530748 EDEM3Q9BZQ6 932 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 RNF181Q9P0P0 153 aa9.01□□□□□ -0.97
CTNND1-227ENST00000530748 E5RI56 91 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 GGCXP38435 758 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 TSGA10IPQ3SY00 556 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 NFRKBQ6P4R8 1299 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 FBXO38Q6PIJ6 1188 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 RNF217Q8TC41 542 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 OTUD5Q96G74 571 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 ELAC2Q9BQ52 826 aaKnown RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 PHF20Q9BVI0 1012 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 ERCC6L2Q5T890 1561 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 ZC3H13Q5T200 1668 aaKnown RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 A8MXQ7 604 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 TADA3O75528 432 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 ANP32DO95626 131 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 AKR1B1P15121 316 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 DHX34Q14147 1143 aaKnown RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 PDIA5Q14554 519 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 ARID5BQ14865 1188 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 SYDE1Q6ZW31 735 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 RNF25Q96BH1 459 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 CENPKQ9BS16 269 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 SLITRK6Q9H5Y7 841 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 JPH1Q9HDC5 661 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 EMSYQ7Z589 1322 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 PRKCBP05771 671 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 KITP10721 976 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 LCP1P13796 627 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 EEF1B2P24534 225 aaKnown RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 MXD4Q14582 209 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 HABP4Q5JVS0 413 aaKnown RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 C12orf60Q5U649 245 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 SHC4Q6S5L8 630 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 LDHDQ86WU2 507 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 TRIM45Q9H8W5 580 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 EML4Q9HC35 981 aaKnown RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 EIF2AK3Q9NZJ5 1116 aaKnown RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 FBXO2Q9UK22 296 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 CAPN11Q9UMQ6 739 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 DFFAO00273 331 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 PPP1R12AO14974 1030 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 PPP2R2AP63151 447 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 CDC42EP1Q00587 391 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 GPS1Q13098 491 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 ZBTB41Q5SVQ8 909 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 TEDDM1Q5T9Z0 273 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 ATG9AQ7Z3C6 839 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 TTC30AQ86WT1 665 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 STAG2Q8N3U4 1231 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 RAPGEF5Q92565 580 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 MYCBPQ99417 103 aaPredicted RBP9□□□□□ -0.97
CTNND1-227ENST00000530748 VPS11Q9H270 941 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 PCDHA10Q9Y5I2 948 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 LMTK2Q8IWU2 1503 aa9□□□□□ -0.97
CTNND1-227ENST00000530748 PP2D1A8MPX8 630 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PDXKO00764 312 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PDIA2Q13087 525 aaKnown RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 MTMR2Q13614 643 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 E2F5Q15329 346 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 TADA2BQ86TJ2 420 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 RNF168Q8IYW5 571 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 ST13P4Q8IZP2 240 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PPHLN1Q8NEY8 458 aaKnown RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 NSUN4Q96CB9 384 aaKnown RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 CEP19Q96LK0 163 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 CRAMP1Q96RY5 1269 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 SUDS3Q9H7L9 328 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 ITSN1Q15811 1721 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PI4K2BG5E9Z4 385 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PNMA6AP0CW24 399 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 GUCY2CP25092 1073 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 IFNA8P32881 189 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 NNMTP40261 264 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 NOP14P78316 857 aaKnown RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 BEND6Q5SZJ8 279 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 FAM102AQ5T9C2 384 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 SRBD1Q8N5C6 995 aaKnown RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PIP4K2CQ8TBX8 421 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 ZNF512BQ96KM6 892 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 TAF1DQ9H5J8 278 aaPredicted RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PPARGC1AQ9UBK2 798 aaKnown RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 FLT1P17948 1338 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 ABCA9Q8IUA7 1624 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 HNRNPCL2B2RXH8 293 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 PSMD3O43242 534 aa8.99□□□□□ -0.97
CTNND1-227ENST00000530748 HNRNPCL1O60812 293 aaKnown RBP8.99□□□□□ -0.97
CTNND1-227ENST00000530748 MYCP01106 439 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms