RNA–Protein interactions for RNA: ENST00000530660.5

PCF11-204, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 2

Gene PCF11, Length 3,309 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-204ENST00000530660 MYH3P11055 1940 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 TMEM110-MUSTN1A8MSY1 372 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 TRAFD1O14545 582 aaPredicted RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 PDE8BO95263 885 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 MLH1P40692 756 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 TRAPPC10P48553 1259 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 PHEXP78562 749 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 SULT2A1Q06520 285 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 DAB2IPQ5VWQ8 1189 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 TBC1D9BQ66K14 1250 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 SLFN11Q7Z7L1 901 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 ST13P4Q8IZP2 240 aaPredicted RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 MKL1Q969V6 931 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 CDK5RAP3Q96JB5 506 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 OLFM3Q96PB7 478 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 CDC42EP4Q9H3Q1 356 aaKnown RBP15.12■□□□□ 0.01
PCF11-204ENST00000530660 PFDN4Q9NQP4 134 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 ZFP69BQ9UJL9 534 aa15.12■□□□□ 0.01
PCF11-204ENST00000530660 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.11■□□□□ 0.01
PCF11-204ENST00000530660 BTNL10A8MVZ5 291 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 DCTN3O75935 186 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 HARSP12081 509 aaKnown RBP15.11■□□□□ 0.01
PCF11-204ENST00000530660 AMPD1P23109 780 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 RASGRF1Q13972 1273 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 RRP1BQ14684 758 aaKnown RBP15.11■□□□□ 0.01
PCF11-204ENST00000530660 SYNCQ9H7C4 482 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 AMFRQ9UKV5 643 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 ASMTLO95671 621 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 RCAN1P53805 252 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 INF2Q27J81 1249 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 RBM26Q5T8P6 1007 aaKnown RBP15.11■□□□□ 0.01
PCF11-204ENST00000530660 KLC3Q6P597 504 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 ISLR2Q6UXK2 745 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 ARHGEF18Q6ZSZ5 1173 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 CABP7Q86V35 215 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 METTL14Q9HCE5 456 aaKnown RBP15.11■□□□□ 0.01
PCF11-204ENST00000530660 TMOD4Q9NZQ9 345 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 TMEM98Q9Y2Y6 226 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 RTL9Q8NET4 1388 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 UMODL1Q5DID0 1318 aa15.11■□□□□ 0.01
PCF11-204ENST00000530660 GSC2O15499 205 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 PGM3O95394 542 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 CETPP11597 493 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 GNAT2P19087 354 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 HOXD12P35452 270 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 STRN3Q13033 797 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 CCDC92Q53HC0 331 aaPredicted RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 IFIT1BQ5T764 474 aaKnown RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 SYDE2Q5VT97 1194 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 HSPBAP1Q96EW2 488 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 CYTH2Q99418 400 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 RPL26L1Q9UNX3 145 aaKnown RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 CYP2D7A0A087X1C5 515 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 FAM187AA6NFU0 413 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 SPAG7O75391 227 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 CDK4P11802 303 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 PTGIRP43119 386 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 TMEM266Q2M3C6 531 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 TTC27Q6P3X3 843 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 RINLQ6ZS11 566 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 IRF2BP2Q7Z5L9 587 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 CATIPQ7Z7H3 387 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 NELFCDQ8IXH7 590 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 NME8Q8N427 588 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 SRBD1Q8N5C6 995 aaKnown RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 CEP70Q8NHQ1 597 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 FNBP1Q96RU3 617 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 ZSCAN10Q96SZ4 725 aaPredicted RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 ROPN1BQ9BZX4 212 aaPredicted RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 CCSER1Q9C0I3 900 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 RNF41Q9H4P4 317 aaPredicted RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 EBF3Q9H4W6 596 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 ROPN1Q9HAT0 212 aaPredicted RBP15.1■□□□□ 0.01
PCF11-204ENST00000530660 UBN1Q9NPG3 1134 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.1■□□□□ 0.011e-6■■■■□ 23.3
PCF11-204ENST00000530660 STARD13Q9Y3M8 1113 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 USP1O94782 785 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 TXKP42681 527 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 DSG1Q02413 1049 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 TSHZ1Q6ZSZ6 1077 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 CCDC125Q86Z20 511 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 MCUR1Q96AQ8 359 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 SERPINB12Q96P63 405 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 C7orf25Q9BPX7 421 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 ZNF212Q9UDV6 495 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 RASAL2Q9UJF2 1139 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 FLT1P17948 1338 aa15.1■□□□□ 0.01
PCF11-204ENST00000530660 UQCRFS1P1P0C7P4 283 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 DRG2P55039 364 aaKnown RBP15.09■□□□□ 0.01
PCF11-204ENST00000530660 TRIM67Q6ZTA4 783 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 PRUNE1Q86TP1 453 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 C10orf82Q8WW14 230 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 FAM81BQ96LP2 452 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 ECSITQ9BQ95 431 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 TIAM2Q8IVF5 1701 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 CFAP69A5D8W1 941 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 GYG2O15488 501 aa15.09■□□□□ 0.01
PCF11-204ENST00000530660 DDX3YO15523 660 aaKnown RBP15.09■□□□□ 0.01
PCF11-204ENST00000530660 VPS41P49754 854 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms