RNA–Protein interactions for RNA: ENST00000530567.1

CAPN1-220, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 1,415 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-220ENST00000530567 TOP1MTQ969P6 601 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 HVCN1Q96D96 273 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 PTPRHQ9HD43 1115 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 FAM105AQ9NUU6 356 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 TNFSF13BQ9Y275 285 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 PIGRP01833 764 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 PROZP22891 400 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 NCBP1Q09161 790 aaKnown RBP23.42■■□□□ 1.34
CAPN1-220ENST00000530567 STRN3Q13033 797 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 HERC6Q8IVU3 1022 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 KIAA0895Q8NCT3 520 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 IKZF4Q9H2S9 585 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 EXOC1Q9NV70 894 aa23.42■■□□□ 1.34
CAPN1-220ENST00000530567 GRXCR1A8MXD5 290 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 N4BP3O15049 544 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 RHOBTB3O94955 611 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 ABCD1P33897 745 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 ALCAMQ13740 583 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 KCNB1Q14721 858 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 L1TD1Q5T7N2 865 aaKnown RBP23.41■■□□□ 1.34
CAPN1-220ENST00000530567 SLC39A4Q6P5W5 647 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 SLC27A1Q6PCB7 646 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 ZPBP2Q6X784 338 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 NPAS4Q8IUM7 802 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 PCDHB2Q9Y5E7 798 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 PCDHA5Q9Y5H7 936 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 GBF1Q92538 1859 aa23.41■■□□□ 1.34
CAPN1-220ENST00000530567 ZNF623O75123 536 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 GJB5O95377 273 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 HOXD13P35453 343 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 STK4Q13043 487 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 SMG8Q8ND04 991 aaKnown RBP23.4■■□□□ 1.34
CAPN1-220ENST00000530567 ELAC1Q9H777 363 aaKnown RBP23.4■■□□□ 1.34
CAPN1-220ENST00000530567 SLC39A2Q9NP94 309 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 RNF19AQ9NV58 838 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 TMEM161AQ9NX61 479 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 PCDHB13Q9Y5F0 798 aa23.4■■□□□ 1.34
CAPN1-220ENST00000530567 EIF3DO15371 548 aaKnown RBP eCLIP23.39■■□□□ 1.33
CAPN1-220ENST00000530567 PRPF6O94906 941 aaKnown RBP23.39■■□□□ 1.33
CAPN1-220ENST00000530567 NPTXRO95502 500 aa23.39■■□□□ 1.33
CAPN1-220ENST00000530567 IBSPP21815 317 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-220ENST00000530567 RAB27AP51159 221 aa23.39■■□□□ 1.33
CAPN1-220ENST00000530567 LRIT3Q3SXY7 679 aa23.39■■□□□ 1.33
CAPN1-220ENST00000530567 FAM117BQ6P1L5 589 aa23.39■■□□□ 1.33
CAPN1-220ENST00000530567 MRPL10Q7Z7H8 261 aaKnown RBP23.39■■□□□ 1.33
CAPN1-220ENST00000530567 SCFD1Q8WVM8 642 aa23.39■■□□□ 1.33
CAPN1-220ENST00000530567 ZBTB45Q96K62 511 aaPredicted RBP23.39■■□□□ 1.33
CAPN1-220ENST00000530567 RC3H2Q9HBD1 1191 aaKnown RBP23.39■■□□□ 1.33
CAPN1-220ENST00000530567 HOOK1Q9UJC3 728 aaKnown RBP23.39■■□□□ 1.33
CAPN1-220ENST00000530567 ZMYM2Q9UBW7 1377 aa23.39■■□□□ 1.33
CAPN1-220ENST00000530567 MEIS3P2A8K0S8 358 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 TOM1L1O75674 476 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 UPP2O95045 317 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 RABGGTBP53611 331 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 PSMD2Q13200 908 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 TMEM132AQ24JP5 1023 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 HAPLN2Q9GZV7 340 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 CDT1Q9H211 546 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 CLSTN2Q9H4D0 955 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 NXF3Q9H4D5 531 aaKnown RBP23.38■■□□□ 1.33
CAPN1-220ENST00000530567 IPPQ9Y573 584 aa23.38■■□□□ 1.33
CAPN1-220ENST00000530567 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-220ENST00000530567 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-220ENST00000530567 TISP43B9A030 160 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 HNRNPDLO14979 420 aaKnown RBP23.37■■□□□ 1.33
CAPN1-220ENST00000530567 SKIP12755 728 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 HTRA4P83105 476 aaPredicted RBP23.37■■□□□ 1.33
CAPN1-220ENST00000530567 CAMK4Q16566 473 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 BMT2Q1RMZ1 405 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 ZNF568Q3ZCX4 644 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 MPZL3Q6UWV2 235 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 ZNF507Q8TCN5 953 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 LPPQ93052 612 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 BICD1Q96G01 975 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 GSDMAQ96QA5 445 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 ACCSQ96QU6 501 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 GDAQ9Y2T3 454 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 HES2Q9Y543 173 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 PCDHB7Q9Y5E2 793 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 UBE4BO95155 1302 aa23.37■■□□□ 1.33
CAPN1-220ENST00000530567 ANKRD63C9JTQ0 380 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 DGKIO75912 1065 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 SMC2O95347 1197 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 EOMESO95936 686 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 STAG3L1P0CL83 205 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 FGFR1P11362 822 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 LIG4P49917 911 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 GATMP50440 423 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 DCAF4L1Q3SXM0 396 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 STXBP4Q6ZWJ1 553 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 SMARCE1Q969G3 411 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 ADPGKQ9BRR6 497 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 RNF39Q9H2S5 420 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 ANKFY1Q9P2R3 1169 aa23.36■■□□□ 1.33
CAPN1-220ENST00000530567 FNDC1Q4ZHG4 1894 aaPredicted RBP23.36■■□□□ 1.33
CAPN1-220ENST00000530567 PBX2P40425 430 aa23.35■■□□□ 1.33
CAPN1-220ENST00000530567 MCL1Q07820 350 aa23.35■■□□□ 1.33
CAPN1-220ENST00000530567 CLLU1OSQ5K130 101 aa23.35■■□□□ 1.33
CAPN1-220ENST00000530567 AGMOQ6ZNB7 445 aa23.35■■□□□ 1.33
CAPN1-220ENST00000530567 CEP120Q8N960 986 aa23.35■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms