RNA–Protein interactions for RNA: ENST00000530404.5

TSPAN4-219, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 818 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-219ENST00000530404 ALDH2P05091 517 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 CNPP09543 421 aaKnown RBP23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 ITGA4P13612 1032 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 KLRC2P26717 231 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 CLCN4P51793 760 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 TAS1R1Q7RTX1 841 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 ASAP3Q8TDY4 903 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 TMEM175Q9BSA9 504 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 APOL6Q9BWW8 343 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 MARCH5Q9NX47 278 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 MIOSQ9NXC5 875 aa23.11■■□□□ 1.29
TSPAN4-219ENST00000530404 DMDP11532 3685 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 INO80B-WBP1J3KQ70 363 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 MYBP10242 640 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 MLH1P40692 756 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 OR1G1P47890 313 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 PTENP60484 403 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 ME3Q16798 604 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 PPFIBP1Q86W92 1011 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 WASF1Q92558 559 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 GAD1Q99259 594 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 PRRX2Q99811 253 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 EMILIN2Q9BXX0 1053 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 KANSL3Q9P2N6 904 aa23.1■■□□□ 1.29
TSPAN4-219ENST00000530404 F8W810 466 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 LILRB3O75022 631 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 SCNN1GP51170 649 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 CAPSQ13938 189 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 CALCRLQ16602 461 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 CDR2LQ86X02 465 aaPredicted RBP23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 COLGALT2Q8IYK4 626 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 UBALD2Q8IYN6 164 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 ZDHHC14Q8IZN3 488 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 ZFP42Q96MM3 310 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 SFXN1Q9H9B4 322 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 BRMS1Q9HCU9 246 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 MRPL17Q9NRX2 175 aaKnown RBP23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 PCDHA12Q9UN75 941 aa23.09■■□□□ 1.29
TSPAN4-219ENST00000530404 VWA8A3KMH1 1905 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 ARL5CA6NH57 179 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 BTBD18B2RXH4 712 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 JAK2O60674 1132 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 TXKP42681 527 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 MBTD1Q05BQ5 628 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 NOTUMQ6P988 496 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 GPR149Q86SP6 731 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 GTF3C6Q969F1 213 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 HERC2P3Q9BVR0 1158 aa23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 TTC12Q9H892 705 aaPredicted RBP23.08■■□□□ 1.29
TSPAN4-219ENST00000530404 H0Y858 1186 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 SOD2P04179 222 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 URODP06132 367 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 MXD4Q14582 209 aaPredicted RBP23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 ANKRD1Q15327 319 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 AMHR2Q16671 573 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 CNNM3Q8NE01 707 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 NSUN7Q8NE18 718 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 PIGOQ8TEQ8 1089 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 HSD17B14Q9BPX1 270 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 CSRNP2Q9H175 543 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 NXF3Q9H4D5 531 aaKnown RBP23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 MAN1C1Q9NR34 630 aa23.07■■□□□ 1.28
TSPAN4-219ENST00000530404 POTEMA6NI47 508 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 B4GALT5O43286 388 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 ARF4P18085 180 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 GLRA2P23416 452 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 AXLP30530 894 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 ARL2P36404 184 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 TFDP1Q14186 410 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 MAEAQ7L5Y9 396 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 DIS3L2Q8IYB7 885 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 PLCD3Q8N3E9 789 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 TMEM105Q8N8V8 129 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 ATOH1Q92858 354 aaPredicted RBP23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 CCDC43Q96MW1 224 aaKnown RBP23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 UBN1Q9NPG3 1134 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 USTQ9Y2C2 406 aa23.06■■□□□ 1.28
TSPAN4-219ENST00000530404 NEMFO60524 1076 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 USO1O60763 962 aaKnown RBP23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 DGAT1O75907 488 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 NPTXRO95502 500 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 AKAP5P24588 427 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 RARRES1P49788 294 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 ANAPC15P60006 121 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 CCDC149Q6ZUS6 474 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 IFNLR1Q8IU57 520 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 RABGGTAQ92696 567 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 B3GALT6Q96L58 329 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 RPS6KC1Q96S38 1066 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 TRIM6Q9C030 488 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 POLR3FQ9H1D9 316 aaPredicted RBP23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 ANKEF1Q9NU02 776 aa23.05■■□□□ 1.28
TSPAN4-219ENST00000530404 ZFHX2Q9C0A1 2572 aaPredicted RBP23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 MYH15Q9Y2K3 1946 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 TEX28O15482 410 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 LYPLA2O95372 231 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 ATP2B1P20020 1258 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 GLUD2P49448 558 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 DSC1Q08554 894 aa23.04■■□□□ 1.28
TSPAN4-219ENST00000530404 CCDC51Q96ER9 411 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms