RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 MECP2P51608 486 aaKnown RBP6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 DLG4P78352 724 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 CST9Q5W186 159 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 CD300LDQ6UXZ3 194 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 ETV3LQ6ZN32 361 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 STRA8Q7Z7C7 330 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 RNF180Q86T96 592 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 STK32CQ86UX6 486 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 IGDCC3Q8IVU1 814 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 CHST14Q8NCH0 376 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 SLC17A8Q8NDX2 589 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 RIC8BQ9NVN3 520 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 ATP23Q9Y6H3 246 aa6.45□□□□□ -1.38
AMBRA1-209ENST00000529963 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 H7C1D1 291 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 CHL1O00533 1208 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 BUB1BO60566 1050 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 HOXB7P09629 217 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 POU3F2P20265 443 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 CNGA1P29973 690 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 LIMS1P48059 325 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 RBM10P98175 930 aaKnown RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 WDR43Q15061 677 aaKnown RBP eCLIP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 BTBD8Q5XKL5 378 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 SAPCD2Q86UD0 394 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 PPM1KQ8N3J5 372 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 PLBD2Q8NHP8 589 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 PHOSPHO1Q8TCT1 267 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 GLIS2Q9BZE0 524 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 CABP5Q9NP86 173 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 H2AFY2Q9P0M6 372 aaPredicted RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 CHPF2Q9P2E5 772 aa6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 LAS1LQ9Y4W2 734 aaKnown RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 MYBBP1AQ9BQG0 1328 aaKnown RBP6.44□□□□□ -1.38
AMBRA1-209ENST00000529963 SLC12A8A0AV02 714 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 ACOT7O00154 380 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 NPTXRO95502 500 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 LRG1P02750 347 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 C8BP07358 591 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 NCAM1P13591 858 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 PTPN1P18031 435 aaKnown RBP6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 STAT3P40763 770 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 PAN2Q504Q3 1202 aaKnown RBP6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 RNF187Q5TA31 235 aaPredicted RBP6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 HHIPL2Q6UWX4 724 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 MIB1Q86YT6 1006 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 NOSTRINQ8IVI9 506 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 FAM126BQ8IXS8 530 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 CCDC146Q8IYE0 955 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 SMARCC2Q8TAQ2 1214 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 RUNDC1Q96C34 613 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 DDX11Q96FC9 970 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 EYA3Q99504 573 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 SPC25Q9HBM1 224 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 DBF4Q9UBU7 674 aaPredicted RBP6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 B4GALT6Q9UBX8 382 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 PGAP2Q9UHJ9 254 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 CNOT7Q9UIV1 285 aaKnown RBP6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 ANKRD36CQ5JPF3 1778 aa6.43□□□□□ -1.38
AMBRA1-209ENST00000529963 YDJCA8MPS7 323 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 N4BP3O15049 544 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 PAX4O43316 350 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 DNAJC6O75061 913 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 FARP2O94887 1054 aaPredicted RBP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 ZBTB48P10074 688 aaPredicted RBP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 RPS12P25398 132 aaKnown RBP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 FXR1P51114 621 aaKnown RBP eCLIP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 IRF9Q00978 393 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 STRN3Q13033 797 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 SF3B3Q15393 1217 aaKnown RBP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 PKN2Q16513 984 aaKnown RBP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 KRT24Q2M2I5 525 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 CR1LQ2VPA4 569 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 FIGNQ5HY92 759 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 TRIM48Q8IWZ4 208 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 NLGN4XQ8N0W4 816 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 AHI1Q8N157 1196 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 PANK1Q8TE04 598 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 CHAC2Q8WUX2 184 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 DPF2Q92785 391 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 FAM89AQ96GI7 184 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 TOE1Q96GM8 510 aaKnown RBP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 FAM84AQ96KN4 292 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 ISCA1Q9BUE6 129 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 CAAP1Q9H8G2 361 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 THG1LQ9NWX6 298 aaKnown RBP6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 HYPKQ9NX55 129 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 DTLQ9NZJ0 730 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 MAPRE3Q9UPY8 281 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 PRKAB1Q9Y478 270 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 IRS2Q9Y4H2 1338 aa6.42□□□□□ -1.38
AMBRA1-209ENST00000529963 PSMD14O00487 310 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 DVL2O14641 736 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 SEMA7AO75326 666 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 KRT1P04264 644 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 TMEM253P0C7T8 217 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 C1QTNF9P0C862 333 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 ATP2A2P16615 1042 aaKnown RBP6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 EPHA5P54756 1037 aa6.41□□□□□ -1.38
AMBRA1-209ENST00000529963 CACNB2Q08289 660 aaPredicted RBP6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms