RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 LRRC43Q8N309 656 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 PDILTQ8N807 584 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 TMEM161BQ8NDZ6 487 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 P2RX5Q93086 422 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 CHAMP1Q96JM3 812 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 C11orf84Q9BUA3 381 aaPredicted RBP13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 PDZD7Q9H5P4 517 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 UBN1Q9NPG3 1134 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 AAASQ9NRG9 546 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 HCSTQ9UBK5 93 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 USP20Q9Y2K6 914 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 KIAA1671Q9BY89 1806 aa13.96□□□□□ -0.17
CCDC90B-216ENST00000529856 N4BP3O15049 544 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 FAM13AO94988 1023 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 NPTXRO95502 500 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 ITGA4P13612 1032 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 NUCB2P80303 420 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 TMEM132AQ24JP5 1023 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 NOMO2Q5JPE7 1267 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 SPOUT1Q5T280 376 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 TAS1R3Q7RTX0 852 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 MYCT1Q8N699 235 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 LEO1Q8WVC0 666 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 KCNN1Q92952 543 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 SPATA32Q96LK8 384 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 MRPL9Q9BYD2 267 aaKnown RBP13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 TRIM6Q9C030 488 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 RSAD1Q9HA92 442 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 PARVGQ9HBI0 331 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 PLAGL2Q9UPG8 496 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 HES2Q9Y543 173 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 PCDHB12Q9Y5F1 795 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 TCHHQ07283 1943 aa13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 COL4A4P53420 1690 aaPredicted RBP13.95□□□□□ -0.18
CCDC90B-216ENST00000529856 MYMKA6NI61 221 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 H0YCG3 227 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 GRM6O15303 877 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 MAPTP10636 758 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 LAG3P18627 525 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 AFF1P51825 1210 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 NCKAP1LP55160 1127 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 E2F4Q16254 413 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 PTPROQ16827 1216 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 ATF7IP2Q5U623 682 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 RESP18Q5W5W9 173 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 EEF1DP3Q658K8 133 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 DYMQ7RTS9 669 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 HACE1Q8IYU2 909 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 KLHL23Q8NBE8 558 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 COLGALT1Q8NBJ5 622 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 SPPL3Q8TCT6 385 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 DDX12PQ92771 950 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 DNAJC19Q96DA6 116 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 MRPL38Q96DV4 380 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 ACO2Q99798 780 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 ADPGKQ9BRR6 497 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 NXF3Q9H4D5 531 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 TBC1D13Q9NVG8 400 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 KANSL3Q9P2N6 904 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 TNFSF13BQ9Y275 285 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 INPP5FQ9Y2H2 1132 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 GIT1Q9Y2X7 761 aa13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 PRRC2BQ5JSZ5 2229 aaKnown RBP13.94□□□□□ -0.18
CCDC90B-216ENST00000529856 INPPL1O15357 1258 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 TRAK2O60296 914 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 TBCAO75347 108 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 ITGB1P05556 798 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 SCP2P22307 547 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 STRN3Q13033 797 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 CCDC85BQ15834 202 aaPredicted RBP13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 CSPP1Q1MSJ5 1256 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 ADALQ6DHV7 355 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 KCNT2Q6UVM3 1135 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 HAUS6Q7Z4H7 955 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 IQUBQ8NA54 791 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 URGCPQ8TCY9 931 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 PPM1EQ8WY54 764 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 APOL6Q9BWW8 343 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 MRPL4Q9BYD3 311 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 SCAND2PQ9GZW5 306 aaPredicted RBP13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 LMAN2LQ9H0V9 348 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 CUEDC2Q9H467 287 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 ZHX3Q9H4I2 956 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 PTPRHQ9HD43 1115 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 ALG13Q9NP73 1137 aaKnown RBP13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 FAM13BQ9NYF5 915 aa13.93□□□□□ -0.18
CCDC90B-216ENST00000529856 ARL5CA6NH57 179 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 POLR2DO15514 142 aaKnown RBP13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 CMA1P23946 247 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 AKAP5P24588 427 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 RNASELQ05823 741 aaKnown RBP13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 CAMK1Q14012 370 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 DCAF4L1Q3SXM0 396 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 APBB1IPQ7Z5R6 666 aaPredicted RBP13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 THNSL1Q8IYQ7 743 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 MICALL1Q8N3F8 863 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 DHX58Q96C10 678 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 ZNF558Q96NG5 402 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 FIZ1Q96SL8 496 aa13.92□□□□□ -0.18
CCDC90B-216ENST00000529856 GAD1Q99259 594 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms