RNA–Protein interactions for RNA: ENST00000529828.5

PTPRC-213, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 2,336 nt, Biotype non stop decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-213ENST00000529828 PALB2Q86YC2 1186 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 KSR1Q8IVT5 923 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 MAML2Q8IZL2 1156 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 FANCBQ8NB91 859 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 PJA1Q8NG27 643 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SMG7Q92540 1137 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 NLRP4Q96MN2 994 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 FDXACB1Q9BRP7 624 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 RPP25Q9BUL9 199 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 RWDD1Q9H446 243 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 WDR6Q9NNW5 1121 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 MRPL17Q9NRX2 175 aaKnown RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SPATA6Q9NWH7 488 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 DACT1Q9NYF0 836 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 SEPT9Q9UHD8 586 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 USP18Q9UMW8 372 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 CEP131Q9UPN4 1083 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 MTF2Q9Y483 593 aaPredicted RBP3.98□□□□□ -1.77
PTPRC-213ENST00000529828 IRAK3Q9Y616 596 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 NUMBLQ9Y6R0 609 aa3.98□□□□□ -1.77
PTPRC-213ENST00000529828 NRP1O14786 923 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 MAGEB2O15479 319 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 OFD1O75665 1012 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 DGAT1O75907 488 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 GLUD1P00367 558 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 FOSP01100 380 aaPredicted RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 RPL17P18621 184 aaKnown RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 MCM5P33992 734 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 OR1G1P47890 313 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 CLK2P49760 499 aaKnown RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 NTHL1P78549 312 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 AP3B2Q13367 1082 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 SNW1Q13573 536 aaKnown RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 GIT2Q14161 759 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 UBXN2BQ14CS0 331 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 ST3GAL2Q16842 350 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 KRTAP5-3Q6L8H2 238 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 ZNF746Q6NUN9 644 aaPredicted RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 AGMOQ6ZNB7 445 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 C15orf39Q6ZRI6 1047 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 CATSPER4Q7RTX7 472 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 RHPN2Q8IUC4 686 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 RABGGTAQ92696 567 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 FGF14Q92915 247 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 ZNF707Q96C28 371 aaPredicted RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 GCOM2Q9BZD3 368 aaPredicted RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 SEMA4AQ9H3S1 761 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 PIDD1Q9HB75 910 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 FAM105AQ9NUU6 356 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 MARCH5Q9NX47 278 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 EPS15L1Q9UBC2 864 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 CDV3Q9UKY7 258 aaKnown RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 NAP1L2Q9ULW6 460 aaPredicted RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 SMG5Q9UPR3 1016 aaKnown RBP3.97□□□□□ -1.77
PTPRC-213ENST00000529828 PCDHA10Q9Y5I2 948 aa3.97□□□□□ -1.77
PTPRC-213ENST00000529828 WDR64B1ANS9 1081 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 SLC27A2O14975 620 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 SGSM2O43147 1006 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 LAMTOR5O43504 91 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 LILRB3O75022 631 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 SOD2P04179 222 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 SFPQP23246 707 aaKnown RBP eCLIP3.96□□□□□ -1.77
PTPRC-213ENST00000529828 GPC5P78333 572 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 HTR4Q13639 388 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 NONOQ15233 471 aaKnown RBP eCLIP3.96□□□□□ -1.77
PTPRC-213ENST00000529828 RTN1Q16799 776 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 PLA2G4FQ68DD2 849 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 PPP1R18Q6NYC8 613 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 PARM1Q6UWI2 310 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 NIPA1Q7RTP0 329 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 SMAP1Q8IYB5 467 aaPredicted RBP3.96□□□□□ -1.77
PTPRC-213ENST00000529828 EXOC6Q8TAG9 804 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 URGCPQ8TCY9 931 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 RUFY2Q8WXA3 655 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 STAMQ92783 540 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 MAP4K1Q92918 833 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 CHAMP1Q96JM3 812 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 TMEM87BQ96K49 555 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 FAM167AQ96KS9 214 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 FAM193BQ96PV7 902 aaPredicted RBP3.96□□□□□ -1.77
PTPRC-213ENST00000529828 RPS6KC1Q96S38 1066 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 HERC2P3Q9BVR0 1158 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 APOL6Q9BWW8 343 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 UNC45AQ9H3U1 944 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 RSAD1Q9HA92 442 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 IL21Q9HBE4 155 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 PARD6AQ9NPB6 346 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.96□□□□□ -1.77
PTPRC-213ENST00000529828 DISC1Q9NRI5 854 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 NRBP2Q9NSY0 501 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 TBC1D22BQ9NU19 505 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 BARHL2Q9NY43 387 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 SUCLA2Q9P2R7 463 aaPredicted RBP3.96□□□□□ -1.77
PTPRC-213ENST00000529828 CACNG4Q9UBN1 327 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 BRPF3Q9ULD4 1205 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 FAN1Q9Y2M0 1017 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 PCDHB2Q9Y5E7 798 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 IGF2RP11717 2491 aa3.96□□□□□ -1.77
PTPRC-213ENST00000529828 CNOT1A5YKK6 2376 aaKnown RBP3.96□□□□□ -1.78
PTPRC-213ENST00000529828 GOLGA8AA7E2F4 631 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms