RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 SPATA31D3P0C874 917 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 PMLP29590 882 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 PTH1RQ03431 593 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 ADCY1Q08828 1119 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 FZD5Q13467 585 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 SPATA31D4Q6ZUB0 917 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 CATSPER4Q7RTX7 472 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 PALB2Q86YC2 1186 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 CNNM3Q8NE01 707 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 RUFY2Q8WXA3 655 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 MBOAT7Q96N66 472 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 SEMA4GQ9NTN9 838 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 FAM217BQ9NTX9 383 aaPredicted RBP13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 MARCH5Q9NX47 278 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 SAMM50Q9Y512 469 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 SLC12A7Q9Y666 1083 aa13.09□□□□□ -0.31
AMBRA1-207ENST00000529553 FAM208BQ5VWN6 2430 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 SH2B2O14492 632 aaPredicted RBP13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 PRC1O43663 620 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 PROS1P07225 676 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 TDGF1P13385 188 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 MCM5P33992 734 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 OR1G1P47890 313 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 PRKCEQ02156 737 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 NUCB1Q02818 461 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 TYW1BQ6NUM6 668 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 TSSK4Q6SA08 328 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 COLGALT2Q8IYK4 626 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 COLEC11Q9BWP8 271 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 DISC1Q9NRI5 854 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 BARHL2Q9NY43 387 aa13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 RALYQ9UKM9 306 aaKnown RBP13.08□□□□□ -0.32
AMBRA1-207ENST00000529553 POMCP01189 267 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 POU2F2P09086 479 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 MYBP10242 640 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 NCLP19338 710 aaKnown RBP13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 CD72P21854 359 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 TARSP26639 723 aaKnown RBP13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 HOXA9P31269 272 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 SFNP31947 248 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 CNR2P34972 360 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 AFF1P51825 1210 aaKnown RBP13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 DSC1Q08554 894 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 MTAPQ13126 283 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 DRP2Q13474 957 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 USP41Q3LFD5 358 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 XKR3Q5GH77 459 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 PRR23CQ6ZRP0 262 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 GRASPQ7Z6J2 395 aaPredicted RBP13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 FGF13Q92913 245 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 MAP4K1Q92918 833 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 CEP89Q96ST8 783 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 PHF20Q9BVI0 1012 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 RWDD1Q9H446 243 aaPredicted RBP13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 AGPAT5Q9NUQ2 364 aa13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 SUCLA2Q9P2R7 463 aaPredicted RBP13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 PRG3Q9Y2Y8 225 aaPredicted RBP13.07□□□□□ -0.32
AMBRA1-207ENST00000529553 MAN2B1O00754 1011 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 ECI2O75521 394 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 RXRAP19793 462 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 CIITAP33076 1130 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 JAK3P52333 1124 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 LIMK1P53667 647 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 AAMPQ13685 434 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 N4BP2L1Q5TBK1 243 aaPredicted RBP13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 IL31Q6EBC2 164 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 B4GALNT3Q6L9W6 998 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 TPRG1Q6ZUI0 275 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 RHPN2Q8IUC4 686 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 ST13P5Q8NFI4 369 aaPredicted RBP13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 RIT2Q99578 217 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 JPH2Q9BR39 696 aaPredicted RBP13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 RBM28Q9NW13 759 aaKnown RBP13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 KCNH3Q9ULD8 1083 aa13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 V9GY48 417 aaPredicted RBP13.06□□□□□ -0.32
AMBRA1-207ENST00000529553 DOCK8Q8NF50 2099 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 TM4SF5O14894 197 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 XYLBO75191 536 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 MAFO75444 373 aaPredicted RBP13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 HOXA11P31270 313 aaPredicted RBP13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 CCR3P51677 355 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 UVSSAQ2YD98 709 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 UBXN11Q5T124 520 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 SYNE3Q6ZMZ3 975 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 RTL10Q7L3V2 364 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 SRGAP1Q7Z6B7 1085 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 SGMS1Q86VZ5 419 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 ZNF687Q8N1G0 1237 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 RDM1Q8NG50 284 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 CHRDQ9H2X0 955 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 IFT122Q9HBG6 1241 aa13.05□□□□□ -0.32
AMBRA1-207ENST00000529553 ARL5CA6NH57 179 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 ITGA4P13612 1032 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 FUT2Q10981 343 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 SIM2Q14190 667 aaPredicted RBP13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 PCBP1Q15365 356 aaKnown RBP eCLIP13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 PRR16Q569H4 304 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 JAKMIP3Q5VZ66 844 aa13.04□□□□□ -0.32
AMBRA1-207ENST00000529553 EXOC8Q8IYI6 725 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms