RNA–Protein interactions for RNA: ENST00000529133.5

CAPN1-217, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 593 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-217ENST00000529133 SEMA6BQ9H3T3 888 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 PDZD7Q9H5P4 517 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 PTPRHQ9HD43 1115 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 ANO10Q9NW15 660 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 CTNND2Q9UQB3 1225 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 TNFSF13BQ9Y275 285 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 NR2E3Q9Y5X4 410 aa12.55□□□□□ -0.4
CAPN1-217ENST00000529133 MYH11P35749 1972 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 BRCA2P51587 3418 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 A0A1B0GUA9 196 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 PSMA7O14818 248 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 N4BP3O15049 544 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 TOM1L1O75674 476 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 PFKMP08237 780 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 CCDC192P0DO97 292 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 FPGSQ05932 587 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 NCBP1Q09161 790 aaKnown RBP12.54□□□□□ -0.4
CAPN1-217ENST00000529133 PPIGQ13427 754 aaKnown RBP eCLIP12.54□□□□□ -0.42e-6■■■□□ 17.2
CAPN1-217ENST00000529133 ZCWPW2Q504Y3 356 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 UBXN11Q5T124 520 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 CENPPQ6IPU0 288 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 KLHL10Q6JEL2 608 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 CNKSR3Q6P9H4 555 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 MPZL3Q6UWV2 235 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 C11orf57Q6ZUT1 292 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-217ENST00000529133 HS2ST1Q7LGA3 356 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 NELFBQ8WX92 580 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 P2RX5Q93086 422 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 CCDC51Q96ER9 411 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 ZBTB45Q96K62 511 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-217ENST00000529133 CDT1Q9H211 546 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 IL23AQ9NPF7 189 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 AGPAT3Q9NRZ7 376 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 TYW1Q9NV66 732 aaKnown RBP12.54□□□□□ -0.4
CAPN1-217ENST00000529133 ANKFY1Q9P2R3 1169 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 DACH1Q9UI36 760 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 STYXL1Q9Y6J8 313 aa12.54□□□□□ -0.4
CAPN1-217ENST00000529133 TRIM49BA6NDI0 452 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 PDXKO00764 312 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 ACRP10323 421 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 CCNE1P24864 410 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 ADSSP30520 456 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 PMS1P54277 932 aaKnown RBP12.53□□□□□ -0.4
CAPN1-217ENST00000529133 EPHB4P54760 987 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 PAK1Q13153 545 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 ZNF568Q3ZCX4 644 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 TWF2Q6IBS0 349 aaKnown RBP12.53□□□□□ -0.4
CAPN1-217ENST00000529133 SLC27A1Q6PCB7 646 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 FAM43BQ6ZT52 329 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-217ENST00000529133 ZBTB33Q86T24 672 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 RPUSD2Q8IZ73 545 aaKnown RBP12.53□□□□□ -0.4
CAPN1-217ENST00000529133 GOLGA5Q8TBA6 731 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 ADAM2Q99965 735 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 LBHD1Q9BQE6 289 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-217ENST00000529133 CBWD1Q9BRT8 395 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 FTHL17Q9BXU8 183 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 EIF2AQ9BY44 585 aaKnown RBP12.53□□□□□ -0.4
CAPN1-217ENST00000529133 HAPLN2Q9GZV7 340 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 TRAF3IP3Q9Y228 551 aa12.53□□□□□ -0.4
CAPN1-217ENST00000529133 A0A0B4J269 797 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 CLDN3O15551 220 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 CALUO43852 315 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 NPTXRO95502 500 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 MCF2P10911 925 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 HARSP12081 509 aaKnown RBP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 ZSCAN20P17040 1043 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 GARTP22102 1010 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 STX17P56962 302 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 SNRPFP62306 86 aaKnown RBP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 MCL1Q07820 350 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 NOLC1Q14978 699 aaKnown RBP eCLIP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 DCAF4L1Q3SXM0 396 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 ANO6Q4KMQ2 910 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 ANKRD40Q6AI12 368 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 SLFN12LQ6IEE8 588 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 TTI2Q6NXR4 508 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 ARMCX5Q6P1M9 558 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 C16orf59Q7L2K0 433 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 RTN4RL1Q86UN2 441 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 C12orf56Q8IXR9 622 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 MED15Q96RN5 788 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 TSG101Q99816 390 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 ADPGKQ9BRR6 497 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 TCHPQ9BT92 498 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 DNAJC25Q9H1X3 360 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 TSPYL2Q9H2G4 693 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 RGS18Q9NS28 235 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 CGNQ9P2M7 1197 aaKnown RBP12.52□□□□□ -0.41
CAPN1-217ENST00000529133 RWDD2AQ9UIY3 292 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 SCN5AQ14524 2016 aa12.52□□□□□ -0.41
CAPN1-217ENST00000529133 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 C9IYK1 514 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 CLIC2O15247 247 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 FAM189A1O60320 539 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 NR3C1P04150 777 aa12.51□□□□□ -0.41
CAPN1-217ENST00000529133 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 MATR3P43243 847 aaKnown RBP eCLIP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 MAGEA10P43363 369 aaPredicted RBP12.51□□□□□ -0.41
CAPN1-217ENST00000529133 CYP2J2P51589 502 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms