RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 NDUFV1P49821 464 aa36.5■■■■□ 3.43
SSSCA1-205ENST00000527920 RBM23Q86U06 439 aaKnown RBP36.5■■■■□ 3.43
SSSCA1-205ENST00000527920 TIPINQ9BVW5 301 aa36.5■■■■□ 3.43
SSSCA1-205ENST00000527920 RNF39Q9H2S5 420 aa36.5■■■■□ 3.43
SSSCA1-205ENST00000527920 NT5C1B-RDH14C9J2C7 533 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 ACKR2O00590 384 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 IL9P15248 144 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 AFF1P51825 1210 aaKnown RBP36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 PLPP4Q5VZY2 271 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 TMC7Q7Z402 723 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 KCNK18Q7Z418 384 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 ZNF280BQ86YH2 543 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 FAM178BQ8IXR5 827 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 MSLNLQ96KJ4 702 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 NXF3Q9H4D5 531 aaKnown RBP36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 DNAJB4Q9UDY4 337 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 HES2Q9Y543 173 aa36.49■■■■□ 3.43
SSSCA1-205ENST00000527920 ARL5CA6NH57 179 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 B4GALT3O60512 393 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 GLP2RO95838 553 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 PRKCBP05771 671 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 SLC11A1P49279 550 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 SMAD4Q13485 552 aaKnown RBP36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 SMC1AQ14683 1233 aaKnown RBP36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 BMS1Q14692 1282 aaKnown RBP36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 C1orf186Q6ZWK4 172 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 DDX53Q86TM3 631 aaKnown RBP36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 TMEM173Q86WV6 379 aaPredicted RBP36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 DRC1Q96MC2 740 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 GBP3Q9H0R5 595 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 C17orf75Q9HAS0 396 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 CLEC1BQ9P126 229 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 CD207Q9UJ71 328 aa36.48■■■■□ 3.43
SSSCA1-205ENST00000527920 N4BP3O15049 544 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 DDHD2O94830 711 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 NPTXRO95502 500 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 COASYQ13057 564 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 PRPF4BQ13523 1007 aaKnown RBP36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 RINT1Q6NUQ1 792 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 MRPL43Q8N983 215 aaKnown RBP36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 PNMA5Q96PV4 448 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 FAM193BQ96PV7 902 aaPredicted RBP36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 GAD1Q99259 594 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 RUSC1Q9BVN2 902 aa36.47■■■■□ 3.43
SSSCA1-205ENST00000527920 SYT1P21579 422 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 MLH1P40692 756 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 KCNC3Q14003 757 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 TMEM119Q4V9L6 283 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 DAW1Q8N136 415 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 ZBP1Q9H171 429 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 PDZD7Q9H5P4 517 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 KCND2Q9NZV8 630 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 PRKAG3Q9UGI9 489 aa36.46■■■■□ 3.43
SSSCA1-205ENST00000527920 PHLPP2Q6ZVD8 1323 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 HIDE1A8MVS5 230 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 PER2O15055 1255 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 POMCP01189 267 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 GUCY2CP25092 1073 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 DSC1Q08554 894 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 SMAD2Q15796 467 aaKnown RBP36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 TMEM184AQ6ZMB5 413 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 CDR2LQ86X02 465 aaPredicted RBP36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 SNX21Q969T3 373 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 CDK5RAP3Q96JB5 506 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 IRAK3Q9Y616 596 aa36.45■■■■□ 3.43
SSSCA1-205ENST00000527920 MBTPS2O43462 519 aa36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 HIP1RO75146 1068 aa36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 ALDH2P05091 517 aa36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 LONP1P36776 959 aaKnown RBP36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 MAPK7Q13164 816 aa36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 VPS52Q8N1B4 723 aa36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 SYT2Q8N9I0 419 aaPredicted RBP36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 SMRP1Q8NCR6 262 aa36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 BCL7CQ8WUZ0 217 aaPredicted RBP36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 GTF3C3Q9Y5Q9 886 aa36.44■■■■□ 3.42
SSSCA1-205ENST00000527920 C2orf71A6NGG8 1288 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 TTLL13PA6NNM8 815 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 SRGAP2BP0DMP2 458 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 NPTX2P47972 431 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 DMP1Q13316 513 aaPredicted RBP36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 GIT2Q14161 759 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 SF3A1Q15459 793 aaKnown RBP36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 ZRSR1Q15695 479 aaKnown RBP36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 CABP7Q86V35 215 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 COLGALT2Q8IYK4 626 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 VN1R2Q8NFZ6 395 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 ZFP42Q96MM3 310 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 ADPGKQ9BRR6 497 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 KIFC3Q9BVG8 833 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 FAN1Q9Y2M0 1017 aa36.43■■■■□ 3.42
SSSCA1-205ENST00000527920 CTSAP10619 480 aa36.42■■■■□ 3.42
SSSCA1-205ENST00000527920 SCNN1GP51170 649 aa36.42■■■■□ 3.42
SSSCA1-205ENST00000527920 RESTQ13127 1097 aa36.42■■■■□ 3.42
SSSCA1-205ENST00000527920 APOL6Q9BWW8 343 aa36.42■■■■□ 3.42
SSSCA1-205ENST00000527920 POLD4Q9HCU8 107 aa36.42■■■■□ 3.42
SSSCA1-205ENST00000527920 ARHGAP28Q9P2N2 729 aa36.42■■■■□ 3.42
SSSCA1-205ENST00000527920 RBM19Q9Y4C8 960 aaKnown RBP36.42■■■■□ 3.42
SSSCA1-205ENST00000527920 UBA7P41226 1012 aa36.41■■■■□ 3.42
SSSCA1-205ENST00000527920 SLC12A3P55017 1021 aa36.41■■■■□ 3.42
SSSCA1-205ENST00000527920 CLUL1Q15846 466 aa36.41■■■■□ 3.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms