RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 TSPY1Q01534 308 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 PPP2R5CQ13362 524 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 CPLX4Q7Z7G2 160 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 RNF180Q86T96 592 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 ZBED2Q9BTP6 218 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 SCN11AQ9UI33 1791 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.14■□□□□ 0.17
USP47-207ENST00000527733 NAMPTP43490 491 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 PNMA5Q96PV4 448 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 PPANQ9NQ55 473 aaKnown RBP16.14■□□□□ 0.17
USP47-207ENST00000527733 HOMER3Q9NSC5 361 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 A8MXQ7 604 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 RPS6KA5O75582 802 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 NPTX2P47972 431 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 PSMC6P62333 389 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 KCTD6Q8NC69 237 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 MTMR9Q96QG7 549 aa16.14■□□□□ 0.17
USP47-207ENST00000527733 NKRFO15226 690 aaKnown RBP eCLIP16.13■□□□□ 0.17
USP47-207ENST00000527733 PLA2G6O60733 806 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 SNHG28P0DPA3 235 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 TMEM132DQ14C87 1099 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 SGSM1Q2NKQ1 1148 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 TAOK1Q7L7X3 1001 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 PALM2Q8IXS6 379 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 PRPF31Q8WWY3 499 aaKnown RBP16.13■□□□□ 0.17
USP47-207ENST00000527733 TMEM8AQ9HCN3 771 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 SSU72P8A0A1W2PR75 194 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 IL18RAPO95256 599 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 SLC9A1P19634 815 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 CTNNA1P35221 906 aaKnown RBP16.13■□□□□ 0.17
USP47-207ENST00000527733 MRPS9P82933 396 aaKnown RBP16.13■□□□□ 0.17
USP47-207ENST00000527733 CENPPQ6IPU0 288 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 VSIG10LQ86VR7 867 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 AFG1LQ8WV93 481 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 ERGIC2Q96RQ1 377 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 AGPAT5Q9NUQ2 364 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 LCMT1Q9UIC8 334 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 CYP26A1O43174 497 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 SLITRK3O94933 977 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 ACTN1P12814 892 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 ADORA2AP29274 412 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 TTI2Q6NXR4 508 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 ABHD16BQ9H3Z7 469 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 M0QYV0 167 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 NFKBIEO00221 500 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 HEXIM1O94992 359 aaKnown RBP16.13■□□□□ 0.17
USP47-207ENST00000527733 ZNF18P17022 549 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 RARRES1P49788 294 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 FKBP1BP68106 108 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 AGPAT1Q99943 283 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 VTA1Q9NP79 307 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 PLCB1Q9NQ66 1216 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 OLFML3Q9NRN5 406 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 FAM114A2Q9NRY5 505 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 SEPT10Q9P0V9 454 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 PTPN22Q9Y2R2 807 aa16.13■□□□□ 0.17
USP47-207ENST00000527733 MCF2LO15068 1137 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 KRT15P19012 456 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 ZNF720Q7Z2F6 126 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 AFAP1L1Q8TED9 768 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 P3H4Q92791 437 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 CHP1Q99653 195 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 KDM3BQ7LBC6 1761 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 SGK1O00141 431 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 CLCN3P51790 818 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 INHBEP58166 350 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 ZNF280AP59817 542 aaPredicted RBP16.12■□□□□ 0.17
USP47-207ENST00000527733 TMEM119Q4V9L6 283 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 PGBD4Q96DM1 585 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 ECEL1O95672 775 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 MOB2Q70IA6 237 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 SH3BP5LQ7L8J4 393 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 CTAGE3PQ8IX95 158 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 HINFPQ9BQA5 517 aa16.12■□□□□ 0.17
USP47-207ENST00000527733 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.12■□□□□ 0.17
USP47-207ENST00000527733 H3BRB1 525 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 ZRANB2O95218 330 aaKnown RBP eCLIP16.11■□□□□ 0.17
USP47-207ENST00000527733 KLRC1P26715 233 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 ANKS4BQ8N8V4 417 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 ATP8B4Q8TF62 1192 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 FUCA2Q9BTY2 467 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 TUT1Q9H6E5 874 aaKnown RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 CYP39A1Q9NYL5 469 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 DIS3Q9Y2L1 958 aaKnown RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 C17orf102A2RUQ5 167 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 HLA-DRAP01903 254 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 DYNLT1P63172 113 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 MTF1Q14872 753 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 CDO1Q16878 200 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 LY6KQ17RY6 165 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 NOTUMQ6P988 496 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 ZNF564Q8TBZ8 553 aaPredicted RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 TNIP3Q96KP6 325 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 FHOD1Q9Y613 1164 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 CLTAP09496 248 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 PHBP35232 272 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 KCNJ6P48051 423 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 PSMC1P62191 440 aaKnown RBP16.11■□□□□ 0.17
USP47-207ENST00000527733 ZBTB16Q05516 673 aa16.11■□□□□ 0.17
USP47-207ENST00000527733 SNX1Q13596 522 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms