RNA–Protein interactions for RNA: ENST00000527464.5

NR1H3-229, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 1 (best)

Gene NR1H3, Length 1,183 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-229ENST00000527464 K7ERI5 159 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 ZSCAN22P10073 491 aaPredicted RBP18.6■□□□□ 0.57
NR1H3-229ENST00000527464 DNAJB1P25685 340 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 TXLNAP40222 546 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 CEBPZQ03701 1054 aaKnown RBP18.6■□□□□ 0.57
NR1H3-229ENST00000527464 KARSQ15046 597 aaKnown RBP18.6■□□□□ 0.57
NR1H3-229ENST00000527464 LONRF3Q496Y0 759 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 APBB1IPQ7Z5R6 666 aaPredicted RBP18.6■□□□□ 0.57
NR1H3-229ENST00000527464 SLC39A11Q8N1S5 342 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 KRI1Q8N9T8 703 aaKnown RBP18.6■□□□□ 0.57
NR1H3-229ENST00000527464 SPIRE2Q8WWL2 714 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 SYMPKQ92797 1274 aaKnown RBP18.6■□□□□ 0.57
NR1H3-229ENST00000527464 ADPGKQ9BRR6 497 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 POLD4Q9HCU8 107 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 TLR9Q9NR96 1032 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 ARHGAP28Q9P2N2 729 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 CCDC39Q9UFE4 941 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 ODF2LQ9ULJ1 636 aa18.6■□□□□ 0.57
NR1H3-229ENST00000527464 NPTXRO95502 500 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 PLS3P13797 630 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 PLCG1P19174 1290 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 SCP2P22307 547 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 SMTNP53814 917 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 BCAR1P56945 870 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 TMEM132AQ24JP5 1023 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 ATL3Q6DD88 541 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 RAD54LQ92698 747 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 PABPC5Q96DU9 382 aaKnown RBP18.59■□□□□ 0.57
NR1H3-229ENST00000527464 TMEM175Q9BSA9 504 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 PDZD7Q9H5P4 517 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 NRDE2Q9H7Z3 1164 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 UBE2ZQ9H832 354 aaPredicted RBP18.59■□□□□ 0.57
NR1H3-229ENST00000527464 KMT5AQ9NQR1 393 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 BLOC1S4Q9NUP1 217 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 STK17AQ9UEE5 414 aa18.59■□□□□ 0.57
NR1H3-229ENST00000527464 FSD2A1L4K1 749 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 H0YCG3 227 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 ZC3H11AO75152 810 aaKnown RBP eCLIP18.58■□□□□ 0.56
NR1H3-229ENST00000527464 YEATS4O95619 227 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 DDIT3P35638 169 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 STK38Q15208 465 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 DCAF4L1Q3SXM0 396 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 ARSHQ5FYA8 562 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 GPBP1Q86WP2 473 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 LINC00301Q8NCQ3 95 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 TMEM169Q96HH4 297 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 EPSTI1Q96J88 318 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 FAM193BQ96PV7 902 aaPredicted RBP18.58■□□□□ 0.56
NR1H3-229ENST00000527464 KIFC3Q9BVG8 833 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 RNF39Q9H2S5 420 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 NXF3Q9H4D5 531 aaKnown RBP18.58■□□□□ 0.56
NR1H3-229ENST00000527464 NGRNQ9NPE2 291 aaKnown RBP18.58■□□□□ 0.56
NR1H3-229ENST00000527464 LARSQ9P2J5 1176 aaKnown RBP18.58■□□□□ 0.56
NR1H3-229ENST00000527464 STK39Q9UEW8 545 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 HES2Q9Y543 173 aa18.58■□□□□ 0.56
NR1H3-229ENST00000527464 BDP1A6H8Y1 2624 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 SPTBN5Q9NRC6 3674 aaKnown RBP18.57■□□□□ 0.56
NR1H3-229ENST00000527464 ARL5CA6NH57 179 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 FSCN2O14926 492 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 PPP6R2O75170 966 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 F13A1P00488 732 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 GALTP07902 379 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 LIG1P18858 919 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 NT5DC1Q5TFE4 455 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 ATF7IP2Q5U623 682 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 CDR2LQ86X02 465 aaPredicted RBP18.57■□□□□ 0.56
NR1H3-229ENST00000527464 MICAL1Q8TDZ2 1067 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 LARP4BQ92615 738 aaKnown RBP18.57■□□□□ 0.56
NR1H3-229ENST00000527464 KCNN1Q92952 543 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 GAD1Q99259 594 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 TNFSF13BQ9Y275 285 aa18.57■□□□□ 0.56
NR1H3-229ENST00000527464 TDRD15B5MCY1 1934 aaKnown RBP18.57■□□□□ 0.56
NR1H3-229ENST00000527464 TTLL13PA6NNM8 815 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 SFI1A8K8P3 1242 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 SPTLC2O15270 562 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 ALDH2P05091 517 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 IRS1P35568 1242 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 PBX3P40426 434 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 MLH1P40692 756 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 TFF2Q03403 129 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 HYAL1Q12794 435 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 MCM6Q14566 821 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 BMS1Q14692 1282 aaKnown RBP18.56■□□□□ 0.56
NR1H3-229ENST00000527464 CTC1Q2NKJ3 1217 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 SPECC1Q5M775 1068 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 CCDC73Q6ZRK6 1079 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 USP49Q70CQ1 688 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 ZNF280BQ86YH2 543 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 LRRC15Q8TF66 581 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 IGSF21Q96ID5 467 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 CLIC6Q96NY7 704 aa18.56■□□□□ 0.56
NR1H3-229ENST00000527464 CDCA3Q99618 268 aaPredicted RBP18.56■□□□□ 0.56
NR1H3-229ENST00000527464 MRPL4Q9BYD3 311 aaKnown RBP18.56■□□□□ 0.56
NR1H3-229ENST00000527464 SLC16A4O15374 487 aa18.55■□□□□ 0.56
NR1H3-229ENST00000527464 DDHD2O94830 711 aa18.55■□□□□ 0.56
NR1H3-229ENST00000527464 POMCP01189 267 aa18.55■□□□□ 0.56
NR1H3-229ENST00000527464 EDN1P05305 212 aa18.55■□□□□ 0.56
NR1H3-229ENST00000527464 SLC11A1P49279 550 aa18.55■□□□□ 0.56
NR1H3-229ENST00000527464 AFF1P51825 1210 aaKnown RBP18.55■□□□□ 0.56
NR1H3-229ENST00000527464 ZNF131P52739 623 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms