RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 CCDC51Q96ER9 411 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 TMEM169Q96HH4 297 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 ZFP42Q96MM3 310 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 CCDC43Q96MW1 224 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 GAD1Q99259 594 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 LRFN3Q9BTN0 628 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 MMTAG2Q9BU76 263 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 APOL5Q9BWW9 433 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 C1QTNF1Q9BXJ1 281 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 NXF3Q9H4D5 531 aaKnown RBP11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 MARCH5Q9NX47 278 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 LRWD1Q9UFC0 647 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 CDH22Q9UJ99 828 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 KIAA1024Q9UPX6 916 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 FAM50BQ9Y247 325 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 CNTNAP2Q9UHC6 1331 aa11.57□□□□□ -0.56
PRPF40B-204ENST00000527253 ARHGEF35A5YM69 484 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 ARL5CA6NH57 179 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 LRRIQ4A6NIV6 560 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 E9PMD0 336 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 F8W810 466 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 NRP1O14786 923 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 GPR37L1O60883 481 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 NPTXRO95502 500 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 EFEMP2O95967 443 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 CTSAP10619 480 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 MUTP22033 750 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 AKAP5P24588 427 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 MLH1P40692 756 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 MCTP1Q6DN14 999 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 TAS1R1Q7RTX1 841 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 KCNK18Q7Z418 384 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 CNNM3Q8NE01 707 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 URGCPQ8TCY9 931 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 SLC22A17Q8WUG5 538 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 TMEM175Q9BSA9 504 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 KIFC3Q9BVG8 833 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 APOL6Q9BWW8 343 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 CCDC113Q9H0I3 377 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 CXCL16Q9H2A7 254 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 BHMT2Q9H2M3 363 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 DDX19AQ9NUU7 478 aaKnown RBP11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 KANSL3Q9P2N6 904 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 HCFC2Q9Y5Z7 792 aa11.56□□□□□ -0.56
PRPF40B-204ENST00000527253 C5orf42Q9H799 3197 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 LOC730098B7Z3J9 87 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 LILRB3O75022 631 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 ALDH2P05091 517 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 PRPHP41219 470 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 SCNN1GP51170 649 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 DSC1Q08554 894 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 PTPN14Q15678 1187 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 FAM187BQ17R55 369 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 TMEM31Q5JXX7 168 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 EEF1DP3Q658K8 133 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 HAUS3Q68CZ6 603 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 KANK3Q6NY19 840 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 SLC27A1Q6PCB7 646 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 RNF135Q8IUD6 432 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 DAW1Q8N136 415 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 SNX29Q8TEQ0 813 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 PNMA5Q96PV4 448 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 PDZD7Q9H5P4 517 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 UBN1Q9NPG3 1134 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 KLK14Q9P0G3 267 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 FAN1Q9Y2M0 1017 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 GIT1Q9Y2X7 761 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 IRAK3Q9Y616 596 aa11.55□□□□□ -0.56
PRPF40B-204ENST00000527253 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 DCXO43602 365 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 SSBP05455 408 aaKnown RBP eCLIP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 EPCAMP16422 314 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 NAMPTP43490 491 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 ATP2C1P98194 919 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 NCBP1Q09161 790 aaKnown RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 MAPK7Q13164 816 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 CBX2Q14781 532 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 NT5DC1Q5TFE4 455 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 DTHD1Q6ZMT9 781 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 RNF168Q8IYW5 571 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 C12orf76Q8N812 135 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 RABGGTAQ92696 567 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 KLHL5Q96PQ7 755 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 FAM193BQ96PV7 902 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 RUSC1Q9BVN2 902 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 PHF7Q9BWX1 381 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 UPF2Q9HAU5 1272 aaKnown RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 PRMT7Q9NVM4 692 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 CACNG4Q9UBN1 327 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 MUTYHQ9UIF7 546 aa11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 PRG3Q9Y2Y8 225 aaPredicted RBP11.54□□□□□ -0.56
PRPF40B-204ENST00000527253 TECTAO75443 2155 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 FSD2A1L4K1 749 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 LAD1O00515 517 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 ACKR2O00590 384 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 PRKCBP05771 671 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 CNPP09543 421 aaKnown RBP11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 WEE2P0C1S8 567 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 ALADP13716 330 aa11.53□□□□□ -0.56
PRPF40B-204ENST00000527253 LIG1P18858 919 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms