RNA–Protein interactions for RNA: ENST00000527046.5

NEDD8-205, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-205ENST00000527046 BAIAP3O94812 1187 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 CD44P16070 742 aaKnown RBP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 SFPQP23246 707 aaKnown RBP eCLIP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 AXLP30530 894 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 AFF1P51825 1210 aaKnown RBP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 SMTNP53814 917 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 BMT2Q1RMZ1 405 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 L1TD1Q5T7N2 865 aaKnown RBP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 PSRC1Q6PGN9 363 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 FAM43BQ6ZT52 329 aaPredicted RBP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 SLC24A5Q71RS6 500 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 MAP4K3Q8IVH8 894 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 GSDMAQ96QA5 445 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 FTHL17Q9BXU8 183 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 MRPL44Q9H9J2 332 aaKnown RBP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 RC3H2Q9HBD1 1191 aaKnown RBP11.84□□□□□ -0.51
NEDD8-205ENST00000527046 TMEM63CQ9P1W3 806 aa11.84□□□□□ -0.51
NEDD8-205ENST00000527046 GRXCR1A8MXD5 290 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 PSMD2Q13200 908 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 PRPF4BQ13523 1007 aaKnown RBP11.83□□□□□ -0.52
NEDD8-205ENST00000527046 MORC3Q14149 939 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 ATF7IP2Q5U623 682 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 ISM2Q6H9L7 571 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 ZPBP2Q6X784 338 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 AGMOQ6ZNB7 445 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 ECHDC2Q86YB7 292 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 TMEM192Q8IY95 271 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 SMYD4Q8IYR2 804 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-205ENST00000527046 CEP120Q8N960 986 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 GSTCDQ8NEC7 633 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 ZNF689Q96CS4 500 aaPredicted RBP11.83□□□□□ -0.52
NEDD8-205ENST00000527046 MED15Q96RN5 788 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 KCTD10Q9H3F6 313 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 FAM105AQ9NUU6 356 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 MIOSQ9NXC5 875 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 KIAA1468Q9P260 1216 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 PIN4Q9Y237 131 aaKnown RBP11.83□□□□□ -0.52
NEDD8-205ENST00000527046 HES2Q9Y543 173 aa11.83□□□□□ -0.52
NEDD8-205ENST00000527046 A0A0B4J269 797 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 PPP1R3GB7ZBB8 358 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 EIF3DO15371 548 aaKnown RBP eCLIP11.82□□□□□ -0.52
NEDD8-205ENST00000527046 ARHGEF15O94989 841 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 GCNT3O95395 438 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 LINC00271P0C7V0 271 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 GATMP50440 423 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 HTRA4P83105 476 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-205ENST00000527046 NFKBIBQ15653 356 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 COBLL1Q53SF7 1204 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 ZBTB41Q5SVQ8 909 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 ZNF658Q5TYW1 1059 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-205ENST00000527046 CRELD2Q6UXH1 353 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-205ENST00000527046 LPPQ93052 612 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 HVCN1Q96D96 273 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 MRPL4Q9BYD3 311 aaKnown RBP11.82□□□□□ -0.52
NEDD8-205ENST00000527046 CDT1Q9H211 546 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 SEMA6BQ9H3T3 888 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 ELAC1Q9H777 363 aaKnown RBP11.82□□□□□ -0.52
NEDD8-205ENST00000527046 MAPK8IP1Q9UQF2 711 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 IPPQ9Y573 584 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 PCDHB2Q9Y5E7 798 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 PCDHB13Q9Y5F0 798 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 FNDC1Q4ZHG4 1894 aaPredicted RBP11.82□□□□□ -0.52
NEDD8-205ENST00000527046 GBF1Q92538 1859 aa11.82□□□□□ -0.52
NEDD8-205ENST00000527046 TRIP11Q15643 1979 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 H0YCG3 227 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 GOLGA6L22H0YM25 854 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 TOM1L1O75674 476 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 DGKIO75912 1065 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 ERLIN2O94905 339 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 NPTXRO95502 500 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 ACTN1P12814 892 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 ZSCAN20P17040 1043 aaPredicted RBP11.81□□□□□ -0.52
NEDD8-205ENST00000527046 SCP2P22307 547 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 PRCPP42785 496 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 PMS1P54277 932 aaKnown RBP11.81□□□□□ -0.52
NEDD8-205ENST00000527046 MCL1Q07820 350 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 ZCWPW2Q504Y3 356 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 SEZ6Q53EL9 994 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 CLLU1OSQ5K130 101 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 PRPF38BQ5VTL8 546 aaKnown RBP11.81□□□□□ -0.52
NEDD8-205ENST00000527046 NOTUMQ6P988 496 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 SLC27A1Q6PCB7 646 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 ALKAL1Q6UXT8 129 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 LRRC55Q6ZSA7 311 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 TDHQ8IZJ6 230 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 SLC17A8Q8NDX2 589 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 PHOSPHO2Q8TCD6 241 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 SMARCE1Q969G3 411 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 CASD1Q96PB1 797 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 ACCSQ96QU6 501 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 C1orf112Q9NSG2 853 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 EXOC1Q9NV70 894 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 DMAC2Q9NW81 257 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 TMEM161AQ9NX61 479 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 SLC4A7Q9Y6M7 1214 aa11.81□□□□□ -0.52
NEDD8-205ENST00000527046 BIN1O00499 593 aa11.8□□□□□ -0.52
NEDD8-205ENST00000527046 N4BP3O15049 544 aa11.8□□□□□ -0.52
NEDD8-205ENST00000527046 INPPL1O15357 1258 aa11.8□□□□□ -0.52
NEDD8-205ENST00000527046 B4GALT3O60512 393 aa11.8□□□□□ -0.52
NEDD8-205ENST00000527046 EFCAB14O75071 495 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms