RNA–Protein interactions for RNA: ENST00000526653.1

SF3B2-205, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 329 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-205ENST00000526653 TGS1Q96RS0 853 aaKnown RBP6.46□□□□□ -1.38
SF3B2-205ENST00000526653 GPR62Q9BZJ7 368 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 ALDH8A1Q9H2A2 487 aaPredicted RBP6.46□□□□□ -1.38
SF3B2-205ENST00000526653 EPB41L4BQ9H329 900 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 DCP1AQ9NPI6 582 aaPredicted RBP6.46□□□□□ -1.38
SF3B2-205ENST00000526653 PRKAG3Q9UGI9 489 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 DUSP13Q9UII6 198 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 ADAMTS5Q9UNA0 930 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 FAM50BQ9Y247 325 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 MYH2Q9UKX2 1941 aa6.46□□□□□ -1.38
SF3B2-205ENST00000526653 LRRC37A2A6NM11 1700 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 MED19A0JLT2 244 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 NFIBO00712 420 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 ZEB2O60315 1214 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 LRRN2O75325 713 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 IQCF3P0C7M6 154 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 UBTFL1P0CB47 393 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 AVPR2P30518 371 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 YARSP54577 528 aaKnown RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 CHMP4BP1P59074 171 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 LMNB2Q03252 620 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 CAMK2GQ13555 558 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 FAM47CQ5HY64 1035 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 TMEM201Q5SNT2 666 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 LCNL1Q6ZST4 164 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 EEPD1Q7L9B9 569 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 TSPYL5Q86VY4 417 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 WDR63Q8IWG1 891 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 CCDC144CPQ8IYA2 1237 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 CPXCR1Q8N123 301 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 ANKRD35Q8N283 1001 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 ZSCAN18Q8TBC5 510 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 RAD9AQ99638 391 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 C17orf80Q9BSJ5 609 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 KRTAP4-9Q9BYQ8 210 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 SP110Q9HB58 689 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 COPRSQ9NQ92 184 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 PDGFCQ9NRA1 345 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 CLDND1Q9NY35 253 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 ZNF214Q9UL59 606 aaPredicted RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 KCNH3Q9ULD8 1083 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 DDX49Q9Y6V7 483 aaKnown RBP6.45□□□□□ -1.38
SF3B2-205ENST00000526653 FRMPD3Q5JV73 1810 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 ASTN1O14525 1302 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 TNKSO95271 1327 aa6.45□□□□□ -1.38
SF3B2-205ENST00000526653 CACNA1HO95180 2353 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 LINC01553A4QN01 128 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 BPNT1O95861 308 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 F13A1P00488 732 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 PF4P02776 101 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 UQCRFS1P1P0C7P4 283 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 VCPP55072 806 aaKnown RBP6.44□□□□□ -1.38
SF3B2-205ENST00000526653 NKX3-2P78367 333 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 DEFB103AP81534 67 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 CNTN2Q02246 1040 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 EGR3Q06889 387 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 TCEAL5Q5H9L2 206 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 DIEXFQ68CQ4 756 aaKnown RBP6.44□□□□□ -1.38
SF3B2-205ENST00000526653 SNRNP48Q6IEG0 339 aaKnown RBP6.44□□□□□ -1.38
SF3B2-205ENST00000526653 ARMCX2Q7L311 632 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.44□□□□□ -1.38
SF3B2-205ENST00000526653 RNF141Q8WVD5 230 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 GATAD2BQ8WXI9 593 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 MRPL38Q96DV4 380 aaKnown RBP6.44□□□□□ -1.38
SF3B2-205ENST00000526653 SEZ6LQ9BYH1 1024 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 IRF2BPLQ9H1B7 796 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 VCPKMTQ9H867 229 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 ALG13Q9NP73 1137 aaKnown RBP6.44□□□□□ -1.38
SF3B2-205ENST00000526653 PIH1D3Q9NQM4 214 aaKnown RBP6.44□□□□□ -1.38
SF3B2-205ENST00000526653 TMX2Q9Y320 296 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 DCHS1Q96JQ0 3298 aa6.44□□□□□ -1.38
SF3B2-205ENST00000526653 E9PSI1 815 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 STXBP3O00186 592 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 WDR46O15213 610 aaKnown RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 IDH1O75874 414 aaKnown RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 MYL3P08590 195 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 ZGLP1P0C6A0 271 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 TMEM253P0C7T8 217 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 RFC2P35250 354 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 LTBRP36941 435 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 WDR5P61964 334 aaKnown RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 ZXDAP98168 799 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 DLX2Q07687 328 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 PTPROQ16827 1216 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 CCDC184Q52MB2 194 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 TTC39AQ5SRH9 613 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 FAM83BQ5T0W9 1011 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 DNAJC14Q6Y2X3 702 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 TLK2Q86UE8 772 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 SLFN12Q8IYM2 578 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 ADSSL1Q8N142 457 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 PABPC5Q96DU9 382 aaKnown RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 DYNLL2Q96FJ2 89 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 FGD4Q96M96 766 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 NUP88Q99567 741 aaPredicted RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 FSD1Q9BTV5 496 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 KATNBL1Q9H079 304 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 RNF32Q9H0A6 362 aa6.43□□□□□ -1.38
SF3B2-205ENST00000526653 RAVER2Q9HCJ3 691 aaKnown RBP6.43□□□□□ -1.38
SF3B2-205ENST00000526653 MCM9Q9NXL9 1143 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms