RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 RASA3Q14644 834 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 NAALADL2Q58DX5 795 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 ESRP1Q6NXG1 681 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 MICALCLQ6ZW33 695 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 PLXDC1Q8IUK5 500 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 PHYKPLQ8IUZ5 450 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 UNC5BQ8IZJ1 945 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 HIST1H2AHQ96KK5 128 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 CLUHP3Q96NS8 147 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 ELF4Q99607 663 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 HIST1H2AJQ99878 128 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 POFUT1Q9H488 388 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 SPON1Q9HCB6 807 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 INTS7Q9NVH2 962 aaKnown RBP4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 SNTG2Q9NY99 539 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 TLK1Q9UKI8 766 aa4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 COL3A1P02461 1466 aaPredicted RBP4.23□□□□□ -1.73
ECHDC1-219ENST00000526299 SALL3Q9BXA9 1300 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 PRR5-ARHGAP8B1AHC4 643 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 PROB1E7EW31 1015 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 OPA1O60313 960 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 SPDEFO95238 335 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 MATN4O95460 622 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 ESRRBO95718 433 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 IGLV2-14P01704 120 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 DDX6P26196 483 aaKnown RBP eCLIP4.22□□□□□ -1.732e-7■■■□□ 18.3
ECHDC1-219ENST00000526299 IGFALSP35858 605 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 MPLP40238 635 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 GZMKP49863 264 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 WNT3AP56704 352 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 PDCD4Q53EL6 469 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 KIAA1841Q6NSI8 718 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 BTNL9Q6UXG8 535 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 GPRIN1Q7Z2K8 1008 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 C7orf31Q8N865 590 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 PPP1R14CQ8TAE6 165 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 RTF1Q92541 710 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 SRPK1Q96SB4 655 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 HIRIP3Q9BW71 556 aaPredicted RBP4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 NCOA5Q9HCD5 579 aaKnown RBP4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 MAP3K2Q9Y2U5 619 aa4.22□□□□□ -1.73
ECHDC1-219ENST00000526299 PLD2O14939 933 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 RBMXL2O75526 392 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 PCDH8O95206 1070 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 LY86O95711 162 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 EGR2P11161 476 aaPredicted RBP4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 HSP90B1P14625 803 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 MPP3Q13368 585 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 SERINC3Q13530 473 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 PIK3R6Q5UE93 754 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 ABHD17BQ5VST6 288 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 SLC44A3Q8N4M1 653 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 MSL3Q8N5Y2 521 aaKnown RBP4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 CAGE1Q8TC20 777 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 SCARB1Q8WTV0 552 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 TOMM22Q9NS69 142 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 PODXL2Q9NZ53 605 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 B4GALT6Q9UBX8 382 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 MYPNQ86TC9 1320 aa4.21□□□□□ -1.74
ECHDC1-219ENST00000526299 DNAJC9-AS1A6NH13 148 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 DIRC3C9JPN6 131 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 ASLP04424 464 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 ITGAMP11215 1152 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 ABCG1P45844 678 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 RESTQ13127 1097 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 ANKS6Q68DC2 871 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 UBE2R2Q712K3 238 aaPredicted RBP4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 SRRM1Q8IYB3 904 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 JMYQ8N9B5 988 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 OR10H5Q8NGA6 315 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 ZNF384Q8TF68 577 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 USP36Q9P275 1121 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 USP18Q9UMW8 372 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 PTCH2Q9Y6C5 1203 aa4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 SETD1BQ9UPS6 1966 aaKnown RBP4.2□□□□□ -1.74
ECHDC1-219ENST00000526299 RBM25P49756 843 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 DUSP2Q05923 314 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 ZNF460Q14592 562 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 CDCA2Q69YH5 1023 aaPredicted RBP4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 TAS1R1Q7RTX1 841 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 ARHGEF25Q86VW2 580 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 SMG7Q92540 1137 aaKnown RBP4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 ANKS1AQ92625 1134 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 DUSP26Q9BV47 211 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 SLC29A3Q9BZD2 475 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 KIAA1586Q9HCI6 787 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 POGKQ9P215 609 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 CLCA2Q9UQC9 943 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 SPO11Q9Y5K1 396 aa4.19□□□□□ -1.74
ECHDC1-219ENST00000526299 MARCH11A6NNE9 402 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 ELL2O00472 640 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 MGST3O14880 152 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 DNAJC8O75937 253 aaPredicted RBP4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 C1QL1O75973 258 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 HLA-DOAP06340 250 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 CLEC2LP0C7M8 214 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 JMJD7P0C870 316 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 SPATA31D3P0C874 917 aa4.18□□□□□ -1.74
ECHDC1-219ENST00000526299 FLT3P36888 993 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms