RNA–Protein interactions for RNA: ENST00000525950.5

BDNF-213, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,829 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-213ENST00000525950 CTTNBP2NLQ9P2B4 639 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 FAM86B1E9PN63 330 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 PIK3CDO00329 1044 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 FOXN3O00409 490 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 FTLP02792 175 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 CYP1A2P05177 515 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 FAM86B2P0C5J1 330 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 MAPTP10636 758 aaKnown RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 IRX1P78414 480 aaPredicted RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 CALCOCO2Q13137 446 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 RRP1BQ14684 758 aaKnown RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 PARP6Q2NL67 630 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 FAM133BQ5BKY9 247 aaKnown RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 KCTD1Q719H9 257 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 KRT35Q92764 455 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 ARHGEF2Q92974 986 aaKnown RBP8.59□□□□□ -1.03
BDNF-213ENST00000525950 MAGEB18Q96M61 343 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 PLVAPQ9BX97 442 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 TRIM7Q9C029 511 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 UVRAGQ9P2Y5 699 aa8.59□□□□□ -1.03
BDNF-213ENST00000525950 UFL1O94874 794 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 ECEL1O95672 775 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 COMTP21964 271 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 COPB2P35606 906 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 CETN1Q12798 172 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 PPP2R5CQ13362 524 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 ALCAMQ13740 583 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 KLHL29Q96CT2 875 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 P2RX7Q99572 595 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 AAASQ9NRG9 546 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 SLC5A4Q9NY91 659 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 TMEM120BA0PK00 339 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 IGF2BP3O00425 579 aaKnown RBP eCLIP8.58□□□□□ -1.04
BDNF-213ENST00000525950 TP73O15350 636 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 MAGEB2O15479 319 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 HLA-DOAP06340 250 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 FGFR4P22455 802 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 SLC18A1P54219 525 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 HSPA2P54652 639 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 SNRPFP62306 86 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 KCNJ2P63252 427 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 MYO1EQ12965 1108 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 INTS8Q75QN2 995 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 CCDC105Q8IYK2 499 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 RIBC1Q8N443 379 aaPredicted RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 MYCT1Q8N699 235 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 SH3TC2Q8TF17 1288 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 TBC1D31Q96DN5 1066 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 RAB3IPQ96QF0 476 aaPredicted RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 CDC42EP4Q9H3Q1 356 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 DBR1Q9UK59 544 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 RPL26L1Q9UNX3 145 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 LOXHD1Q8IVV2 1947 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 ADGRA3Q8IWK6 1321 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 TCP11X1B4DZS4 312 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 BBOX1O75936 387 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 LUC7L3O95232 432 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 TTC4O95801 387 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 PYGMP11217 842 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 CALRP27797 417 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 MSH2P43246 934 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 EIF6P56537 245 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 RWDD2BP57060 319 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 GRIK3Q13003 919 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 EPC2Q52LR7 807 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 PPP1R21Q6ZMI0 780 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 ARHGEF18Q6ZSZ5 1173 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 CEP128Q6ZU80 1094 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 BZW1Q7L1Q6 419 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 ADAT2Q7Z6V5 191 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 PALB2Q86YC2 1186 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 LARGE2Q8N3Y3 721 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 TEX9Q8N6V9 391 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 DYDC1Q8WWB3 177 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 FOXP3Q9BZS1 431 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 DDX4Q9NQI0 724 aaKnown RBP8.58□□□□□ -1.04
BDNF-213ENST00000525950 GTF3C4Q9UKN8 822 aa8.58□□□□□ -1.04
BDNF-213ENST00000525950 SLITRK3O94933 977 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 NMT1P30419 496 aaKnown RBP8.57□□□□□ -1.04
BDNF-213ENST00000525950 LACTBP83111 547 aaPredicted RBP8.57□□□□□ -1.04
BDNF-213ENST00000525950 SATB1Q01826 763 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 ICA1Q05084 483 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 PTK6Q13882 451 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 NAA25Q14CX7 972 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 MTFR1Q15390 333 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 CHADLQ6NUI6 762 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 RGS9BPQ6ZS82 235 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 OTOP1Q7RTM1 612 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 APLFQ8IW19 511 aaPredicted RBP8.57□□□□□ -1.04
BDNF-213ENST00000525950 TMEM237Q96Q45 408 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 CTNNAL1Q9UBT7 734 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 CORO1CQ9ULV4 474 aaPredicted RBP8.57□□□□□ -1.04
BDNF-213ENST00000525950 LTBP1Q14766 1721 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 UBAP1LF5GYI3 381 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 ATP11AP98196 1134 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 MAP2K1Q02750 393 aaPredicted RBP8.57□□□□□ -1.04
BDNF-213ENST00000525950 TRAF1Q13077 416 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 FAM71AQ8IYT1 594 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 GMCL1P1Q8NEA9 526 aa8.57□□□□□ -1.04
BDNF-213ENST00000525950 GRK7Q8WTQ7 553 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms