RNA–Protein interactions for RNA: ENST00000525685.5

CD44-219, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 728 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-219ENST00000525685 NRG3P56975 720 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 ADAM8P78325 824 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 ACAP1Q15027 740 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 FSCN1Q16658 493 aaKnown RBP5.13□□□□□ -1.59
CD44-219ENST00000525685 PTPN21Q16825 1174 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 LMBR1LQ6UX01 489 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 BMP8AQ7Z5Y6 402 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 IL17DQ8TAD2 202 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 LMBR1Q8WVP7 490 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 GAB3Q8WWW8 586 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 TMEM176AQ96HP8 235 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 RAX2Q96IS3 184 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 WNT8AQ9H1J5 351 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 SLC6A15Q9H2J7 730 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 TYW1Q9NV66 732 aaKnown RBP5.13□□□□□ -1.59
CD44-219ENST00000525685 DNAI1Q9UI46 699 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 PCDHB6Q9Y5E3 794 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 PPP2R3BQ9Y5P8 575 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 RBM8AQ9Y5S9 174 aaKnown RBP5.13□□□□□ -1.59
CD44-219ENST00000525685 NUMBLQ9Y6R0 609 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 FHAD1B1AJZ9 1412 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 RUSC2Q8N2Y8 1516 aa5.13□□□□□ -1.59
CD44-219ENST00000525685 CEP170Q5SW79 1584 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 SHTN1A0MZ66 631 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 NPIPB8E9PQR5 432 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 NRP2O60462 931 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 OPHN1O60890 802 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 HSP90B1P14625 803 aaKnown RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 HIBADHP31937 336 aaKnown RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 IARSP41252 1262 aaKnown RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 CDK17Q00537 523 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 SPIDRQ14159 915 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.12□□□□□ -1.59
CD44-219ENST00000525685 TOR2AQ5JU69 321 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 ZBTB41Q5SVQ8 909 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 SPTY2D1Q68D10 685 aaPredicted RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 USP51Q70EK9 711 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 KANSL1Q7Z3B3 1105 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 ZBTB46Q86UZ6 589 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 C1orf210Q8IVY1 113 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 ZFPM1Q8IX07 1006 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 D2HGDHQ8N465 521 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 CDYL2Q8N8U2 506 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 RSAD2Q8WXG1 361 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 GCDHQ92947 438 aaPredicted RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 WDR92Q96MX6 357 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 GPHA2Q96T91 129 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 ZNF341Q9BYN7 854 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 TRIM8Q9BZR9 551 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 PITHD1Q9GZP4 211 aaPredicted RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 AASDHPPTQ9NRN7 309 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 POLR3BQ9NW08 1133 aaPredicted RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 HECAQ9UBI9 543 aaPredicted RBP5.12□□□□□ -1.59
CD44-219ENST00000525685 HS3ST3A1Q9Y663 406 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 NUP160Q12769 1436 aa5.12□□□□□ -1.59
CD44-219ENST00000525685 A0A1W2PRX2 142 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 SNUPNO95149 360 aaKnown RBP5.11□□□□□ -1.59
CD44-219ENST00000525685 CT47B1P0C2W7 299 aaPredicted RBP5.11□□□□□ -1.59
CD44-219ENST00000525685 BPIFB4P59827 614 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 CCT2P78371 535 aaKnown RBP5.11□□□□□ -1.59
CD44-219ENST00000525685 DGCR2P98153 550 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 HHEXQ03014 270 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 PTH1RQ03431 593 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 TCIRG1Q13488 830 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 MAN2A1Q16706 1144 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 PITRM1Q5JRX3 1037 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 IGFL4Q6B9Z1 124 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 CLEC14AQ86T13 490 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 SGMS1Q86VZ5 419 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 ANKRD53Q8N9V6 530 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 OR14C36Q8NHC7 312 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 AUTS2Q8WXX7 1259 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 RPL10LQ96L21 214 aaKnown RBP5.11□□□□□ -1.59
CD44-219ENST00000525685 MPHOSPH9Q99550 1183 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 PCED1AQ9H1Q7 454 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 KCTD10Q9H3F6 313 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 DPP7Q9UHL4 492 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 SH3BP1Q9Y3L3 701 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 SPEF1Q9Y4P9 236 aa5.11□□□□□ -1.59
CD44-219ENST00000525685 A0A0A6YYJ9 748 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 KRTAP23-1A1A580 65 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 KLHL33A6NCF5 533 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 RIMBP3CA6NJZ7 1639 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 RIMBP3BA6NNM3 1639 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 ALDH1L1O75891 902 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 FSBPO95073 299 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 C1SP09871 688 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 GPR3P46089 330 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 ERVK-21P61565 698 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 SRSF2Q01130 221 aaKnown RBP5.1□□□□□ -1.59
CD44-219ENST00000525685 KLF10Q13118 480 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 GAGE13Q4V321 117 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 ODR4Q5SWX8 454 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 KRT40Q6A162 431 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 GLB1L2Q8IW92 636 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 CACTINQ8WUQ7 758 aaKnown RBP5.1□□□□□ -1.59
CD44-219ENST00000525685 FUBP3Q96I24 572 aaKnown RBP eCLIP5.1□□□□□ -1.59
CD44-219ENST00000525685 FAXDC2Q96IV6 333 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 UIMC1Q96RL1 719 aa5.1□□□□□ -1.59
CD44-219ENST00000525685 ASPSCR1Q9BZE9 553 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms