RNA–Protein interactions for RNA: ENST00000525469.1

CD44-218, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 705 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-218ENST00000525469 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 FAM95CA0A1B0GW59 222 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 CCDC151A5D8V7 595 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ANKRD62A6NC57 917 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 MYADML2A6NDP7 307 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 H0Y858 1186 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 HYAL3O43820 417 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 LPXNO60711 386 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 COQ9O75208 318 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 EZRP15311 586 aaKnown RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 CASTP20810 708 aaKnown RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 ELF1P32519 619 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ARHGAP25P42331 645 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 JAG1P78504 1218 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 BIRC2Q13490 618 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ITGA7Q13683 1181 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 PLCB4Q15147 1175 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 PPP2R5AQ15172 486 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ZRSR2Q15696 482 aaKnown RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 ENOX2Q16206 610 aaKnown RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 CDC37Q16543 378 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 SHROOM1Q2M3G4 852 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 SGO2Q562F6 1265 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 HSP90AB4PQ58FF6 505 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ALG1LQ6GMV1 187 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 TMED8Q6PL24 325 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 SARM1Q6SZW1 724 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 TSHZ1Q6ZSZ6 1077 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 B4GALNT4Q76KP1 1039 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ASCL5Q7RTU5 278 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 DGLUCYQ7Z3D6 616 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 LUZP1Q86V48 1076 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 MAPKAPK5Q8IW41 473 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 CCDC150Q8NCX0 1101 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 RNF214Q8ND24 703 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 MAGEC3Q8TD91 643 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 SH3RF3Q8TEJ3 882 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 TGFBRAP1Q8WUH2 860 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 MIEF2Q96C03 454 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 MRFAP1L1Q96HT8 127 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 CABS1Q96KC9 395 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 C16orf45Q96MC5 204 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 TGS1Q96RS0 853 aaKnown RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 NRSN2Q9GZP1 204 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ZSCAN16Q9H4T2 348 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 PRDM16Q9HAZ2 1276 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 TLR9Q9NR96 1032 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 TOMM22Q9NS69 142 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 ZNF446Q9NWS9 450 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 CHCHD3Q9NX63 227 aaKnown RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 GPN3Q9UHW5 284 aaPredicted RBP5.59□□□□□ -1.51
CD44-218ENST00000525469 MTUS1Q9ULD2 1270 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 PALD1Q9ULE6 856 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 AP4E1Q9UPM8 1137 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 NUB1Q9Y5A7 615 aa5.59□□□□□ -1.51
CD44-218ENST00000525469 MYO7AQ13402 2215 aa5.59□□□□□ -1.52
CD44-218ENST00000525469 BAHCC1Q9P281 2608 aa5.59□□□□□ -1.52
CD44-218ENST00000525469 PTPRSQ13332 1948 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 PRR23AA6NEV1 266 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 HMGB1P1B2RPK0 211 aaPredicted RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 PROB1E7EW31 1015 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 GIPC1O14908 333 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 SRGAP3O43295 1099 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 FLOT1O75955 427 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 SUPT20HL2P0C7V6 817 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 OAS2P29728 719 aaKnown RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 GSTT1P30711 240 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 SLC8A1P32418 973 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 RFC2P35250 354 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 COPB2P35606 906 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 CD97P48960 835 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 CDR1P51861 262 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 RARSP54136 660 aaKnown RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 GJA9P57773 515 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 IFFO1Q0D2I5 559 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 DRP2Q13474 957 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 RASGRF1Q13972 1273 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 DSC3Q14574 896 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 SF3A1Q15459 793 aaKnown RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 ABCB5Q2M3G0 1257 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 LRRFIP1Q32MZ4 808 aaKnown RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 ZNF792Q3KQV3 632 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 RABL6Q3YEC7 729 aaPredicted RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 MAP9Q49MG5 647 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 CERKLQ49MI3 558 aaPredicted RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 TIGD5Q53EQ6 642 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 RCSD1Q6JBY9 416 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 DNAJC14Q6Y2X3 702 aaPredicted RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 HDXQ7Z353 690 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 CHD1LQ86WJ1 897 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 SKAP1Q86WV1 359 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 ZDHHC13Q8IUH4 622 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 EXOC8Q8IYI6 725 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 ADSSL1Q8N142 457 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 C2CD4AQ8NCU7 369 aaPredicted RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 FAM71BQ8TC56 605 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 NEK9Q8TD19 979 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 ACER1Q8TDN7 264 aa5.58□□□□□ -1.52
CD44-218ENST00000525469 EPS8L3Q8TE67 593 aaKnown RBP5.58□□□□□ -1.52
CD44-218ENST00000525469 NKD2Q969F2 451 aaPredicted RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms